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Table 1 Previously published barley sequences used for re-annotation.

From: Low-pass shotgun sequencing of the barley genome facilitates rapid identification of genes, conserved non-coding sequences and novel repeats

sequence

size (bp)

genes*

TE content (bp)

Reference

AF474373

124052

9

70585 (56.9%)

[49]

AF521177

211664

14

80220 (37.9%)

[50]

AY268139

120562

2

86442 (71.7%)

[51]

AY485643

114996

10

51173 (44.5%)

[52]

AY642926

184425

5

88708 (48.1%)

[32]

AY643842S2

129099

6

92563 (71.7%)

[53]

AY643842S3

160856

5

128684 (80.0%)

[53]

AY661558

439775

2

385242 (87.6%)

[54]

EF067844

518343

5

422967 (81.6%)

[55]

Total

2003772

 

1406590 (70.2%)

 
  1. *Based on expert annotation; count includes gene fragments and pseudogenes and may differ from gene number given in the respective publication.
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BMC Genomics

ISSN: 1471-2164

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