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Figure 3 | BMC Genomics

Figure 3

From: PlantPAN: Plant promoter analysis navigator, for identifying combinatorial cis-regulatory elements with distance constraint in plant gene groups

Figure 3

Results of case study I in "Gene group analysis". (A) Reference case taken from Chawade et al., 2007 [10]. The genes used in the case study are At4g17550.1, At1g20450.1, At5g52310.1, At4g37150.1, and At1g20440.1. The origin of the arrow indicates the regulating TF family and the endpoint of the arrow indicates the target gene. The time scale shown on the vertical axis is cold treatment of plant. (B) CBFHV (AP2) displayed co-occurrences in At4g17550.1, At1g20450.1, At5g52310.1, At4g37150.1, and At1g20440.1 (C) CBFHV (AP2) and DOF represented combinatorial co-occurrences in At5g52310.1, At4g17550.1, At4g37150.1, and At1g20440.1 with 100 bp distance constraint between CBFHV and DOF.

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BMC Genomics

ISSN: 1471-2164

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