a: miRNAs and their previously reported targets (from Argonaute database). miRNAs and their corresponding targets are both differentially regulated during PKD. | ||
---|---|---|
miRNA | Target Genes | Pathways |
miR-128 | ABCB9, BTG1, DSCR1, RASD1 | ABC transporters General |
miR-136 | GRN, PPP1R9B | Â |
miR-147 | HOXA1, PTGFRN | Â |
miR-148 | EGR3, SCN3A | Â |
miR-181b | IGF1R, NKX6-1 | Adherens junction, Maturity onset diabetes of the, Focal adhesion, **Long term depression |
miR-196a | ABCB9, CPB2, IRS1, MAPK10 | ABC transporters General, Complement and coagulation cas, Adipocytokine signaling pathwa, Insulin signaling pathway, Type II diabetes mellitus, Fc epsilon RI signaling pathwa, Focal adhesion, **GnRH signaling pathway, **MAPK signaling pathway, Toll like receptor signaling p, Wnt signaling pathway |
miR-203 | SARA1 | Â |
miR-20 | BTG1, SARA1, YWHAB | Cell cycle |
miR-21 | TPM1 | Â |
mir-216 | GNAZ | **Long term depression |
miR-217 | RHOA | Adherens junction, Axon guidance, Focal adhesion, Leukocyte transendothelial mig, Regulation of actin cytoskelet, TGF beta signaling pathway, T cell receptor signaling path, Tight junction, Wnt signaling pathway |
miR-31 | ATP2B2, DNM1L, EGR3, PPP1R9B, YWHAB | **Calcium signaling pathway, Cell cycle |
miR-7 | SLC23A2 | Â |
miR-7b | HRH3, NCDN, SLC23A2 | **Neuroactive ligand receptor in |
b: miRNAs and their targets (from TargetScan and miRanda). miRNAs and their corresponding targets are both differentially regulated during PKD. | ||
miRNA | Target Genes | Pathways |
miR-128 | ABCB9, BTG2, CACNB2, CNR1, COL3A1, GLRA2, IRS1, NEK6, PDE7B, PTPN5, SV2A, SYT4, YWHAB, NR5A2, NTRK3 | ABC transporters General, **MAPK signaling pathway, **Neuroactive ligand receptor in, **Cell Communication, **ECM receptor interaction, Focal adhesion, Adipocytokine signaling pathwa, Insulin signaling pathway, Type II diabetes mellitus, Purine metabolism, Cell cycle, Maturity onset diabetes of the |
miR-136 | KCNH7 | Â |
miR-148 | OTX1, YWHAB | Cell cycle |
miR-181b | ADAMTS1, ATP2B2, CACNB2, CDH13, CNR1, DUSP6, EGR3, EPHA7, GRIK2, GRM5, GRM7, HOXA1, MMP14 | **Calcium signaling pathway, **MAPK signaling pathway, **Neuroactive ligand receptor in, Axon guidance, Gap junction, **Long term depression, Long term potentiation, **GnRH signaling pathway |
miR-196a | ABCB9, COL3A1, EPHA7, GAS7, OTX1 | ABC transporters General, **Cell Communication, **ECM receptor interaction, Focal adhesion, Axon guidance |
miR-203 | TGFB3 | Cell cycle, **MAPK signaling pathway, TGF beta signaling pathway |
miR-21 | BTG2 | Â |
miR-217 | CLU, FN1, GRIK2, KCNH5, NR4A2, RAP1B | **Cell Communication, **ECM receptor interaction, Focal adhesion, Regulation of actin cytoskelet, **Neuroactive ligand receptor in, Leukocyte transendothelial mig, Long term potentiation, **MAPK signaling pathway |
miR-302b* | ATP2B2 | **Calcium signaling pathway |
miR-302c | ATP2B2, CNR1, SNF1LK | **Calcium signaling pathway, **Neuroactive ligand receptor in |
miR-302c* | ATP2B2, SNF1LK | **Calcium signaling pathway |
miR-30a-3p | CCKBR, COLEC12, EPHA7, GRM7, JUN, KCNAB1, LIN7A, MAMDC1, PRRX1 | **Calcium signaling pathway, **Neuroactive ligand receptor in, Axon guidance, B cell receptor signaling path, Focal adhesion, **GnRH signaling pathway, **MAPK signaling pathway, T cell receptor signaling path, Toll like receptor signaling p, Wnt signaling pathway |
miR-346 | GRM7, LTBP2 | **Neuroactive ligand receptor in |
miR-372 | ATP2B2, NR4A2, SNF1LK, RET, SLC11A2 | **Calcium signaling pathway |
miR-448 | COLEC12, DNM3, GRIK2, IGF1R, IL12B, KCNH7, KCNIP4, SCN3A, SCN5A | **Neuroactive ligand receptor in, Adherens junction, Focal adhesion, **Long term depression, **Cytokine cytokine receptor int, **Jak STAT signaling pathway, Toll like receptor signaling p, **Type I diabetes mellitus |
miR-34b | BTG2, CALCR, DLL1, MYRIP | **Neuroactive ligand receptor in, Notch signaling pathway |
miR-380-3p | BCL2L1 | Amyotrophic lateral sclerosis, Apoptosis, **Jak STAT signaling pathway, Neurodegenerative Disorders |
miR-7b | EGR3 | Â |