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Table 3 Primer sequences used for Q-RT-PCR

From: Effect of thyroid hormone concentration on the transcriptional response underlying induced metamorphosis in the Mexican axolotl (Ambystoma)

Gene

Symbol

Probe-set ID/Direction

Sequence

Desmin

DES

SRV_01373_at_5.1

GGGCCAATTATGAAGCAA

  

SRV_01373_at_3.1

CTTCGACGACTCGCTTTG

Desmocollin 1

DSC1

SRV_04693_a_at_5.1

GAGTCATTGCTCTTCCTTGG

  

SRV_04693_a_at_3.1

TTTTGATGTGCTGCTCCA

Matrix metallopeptidase 13

MMP13

SRV_11423_at_5.1

TGGAAGAAGACTGCGTTGA

  

SRV_11423_at_3.1

ACACTTTGAAGGCCCTTTG

Solute carrier family 31 member 1

SLC31A1

SRV_01215_a_at_5.1

TGTGATCAAACCCCAGGA

  

SRV_01215_a_at_3.1

CGCGCAATCTTAAGGAAC

N/A

N/A

SRV_10216_s_at_5.1

ACATCACTGTCCCCGAAGT

  

SRV_10216_s_at_3.1

GGTCGGGGTCTGTTCAAT

  1. N/A refers to a gene that does not have an established orthology with human. Probe-set ID represents the unique identifier for each probe-set on the custom Ambystoma GeneChip. Forward and reverse primers are denoted by the extensions 5.1 and 3.1 respectively.