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Table 4 Genes previously identified using 50 nM T4 that were not identified using 5 nM T4

From: Effect of thyroid hormone concentration on the transcriptional response underlying induced metamorphosis in the Mexican axolotl (Ambystoma)

Gene

Probe-set ID

Profile

Actin alpha 2

SRV_01045_a_at

LU

Actin alpha 2

SRV_11152_at

LU

Cathepsin S

SRV_02072_at

QLCD

Chormosome 20 open reading frame 92

SRV_05090_at

QLVD

Chromosome 21 open reading frame 33

SRV_02285_at

QLCD

Cytochrome C oxidase subunit VIB polypeptide 1

SRV_01220_at

QLCD

Cytochrome P450 family 2 subfamily c polypeptide 8

SRV_00512_at

QLCD

EPH receptor A1

SRV_12195_at

QC

Eukaryotic translation initiation factor 4E binding protein 3

SRV_01958_at

QV

Ferritin heavy polypeptide 1

SRV_01294_at

QLCD

Glutaredoxin

SRV_01306_at

LD

Glycine C-acetyltransferase

SRV_03491_a_at

LU

High-mobility group 20 A

SRV_04181_at

QLVD

Hypothetical protein FLJ11151

SRV_04229_at

QLVU

Keratin 17

SRV_00389_a_at

QLCD

LSM10 U7 small nuclear RNA associated

SRV_05010_at

QLVD

Mediator of RNA polymerase II transcription subunit 31 homolog

SRV_03843_a_at

QLVD

Myosin heavy polypeptide 11

SRV_11441_at

LU

Myosin light polypeptide 9

SRV_12418_at

LU

Nick-associated protein 1

SRV_03398_at

LU

Non-metastatic cells 7

SRV_03369_at

QLVD

P450 oxidoreductase

SRV_00555_at

LU

Phosphoglucomutase 2

SRV_04215_at

QLVU

Ras-related C3 botulinum toxin substrate 2

SRV_01633_at

QLCD

Ubiquitin specific peptidase 10

SRV_02461_at

QLCU

  1. Probe-set ID represents the unique identifier for each probe-set on the custom Ambystoma GeneChip. Profile refers to the regression profile obtained from the regression analysis of the 50 nM T4 dataset. LU = linear up, QLCD = quadratic linear concave down, QC = quadratic concave, QV = quadratic convex, QLVD = quadratic linear convex down, LD = linear down, QLCU = quadratic linear concave up, and QLVU = quadratic linear convex up.