Table 2 Differentially expressed genes in the two cell lines, MCF-7 and NCI/ADR-RES
From: A highly sensitive and specific system for large-scale gene expression profiling
Category | Gene Ref# | Probe ID | Gene Symbol | Log2 Ratio (NCI/ADR-RES:MCF-7) |
|---|---|---|---|---|
Overexpressed genes in NCI/ADR-RES | NM_004126 | BYH0575 | GNG11 | 6.69 |
| Â | NM_004355 | BYH0596 | CD74 | 6.38 |
| Â | NM_005822 | BYH0767 | DSCR1L1 | 6.20 |
| Â | NM_005238 | BYH0702 | ETS1 | 6.06 |
| Â | NM_002019 | BYH0339 | FLT1 | 5.99 |
| Â | NM_000110 | BYH0058 | DPYD | 5.81 |
| Â | NM_001792 | BYH0302 | CDH2 | 5.65 |
| Â | NM_001336 | BYH0239 | CTSZ | 5.63 |
| Â | NM_024423 | BYH1071 | DSC3 | 5.60 |
| Â | NM_001250 | BYH0223 | CD40 | 5.51 |
| Â | NM_001511 | BYH0257 | CXCL1 | 5.36 |
| Â | NM_000873 | BYH0185 | ICAM2 | 5.32 |
| Â | NM_032727 | BYH1080 | INA | 5.09 |
| Â | NM_005465 | BYH0738 | AKT3 | 4.98 |
| Â | NM_003118 | BYH0466 | SPARC | 4.94 |
| Â | NM_001561 | BYH0267 | TNFRSF9 | 4.91 |
| Â | NM_000576 | BYH0143 | IL1B | 4.62 |
| Â | NM_003644 | BYH0527 | GAS7 | 4.62 |
| Â | NM_001953 | BYH0328 | ECGF1 | 4.62 |
| Â | NM_001839 | BYH0312 | CNN3 | 4.57 |
| Â | NM_033293 | BYH1093 | CASP1 | 4.47 |
| Â | NM_015873 | BYH0979 | VILL | 4.47 |
| Â | NM_057162 | BYH1100 | KLHL4 | 4.39 |
| Â | NM_021913 | BYH1052 | AXL | 4.33 |
| Â | NM_000700 | BYH0168 | ANXA1 | 4.23 |
| Â | NM_000584 | BYH0145 | IL8 | 4.18 |
| Â | NM_000088 | BYH0052 | COL1A1 | 4.10 |
| Â | U28727 | BYH1107 | PAPPA | 4.00 |
| Â | NM_001150 | BYH0210 | ANPEP | 3.62 |
| Â | NM_003659 | BYH0530 | AGPS | 3.61 |
| Â | NM_006097 | BYH0797 | MYL9 | 3.43 |
| Â | NM_012449 | BYH0928 | STEAP1 | 3.35 |
Underexpressed Genes in NCI/ADR-RES | NM_001789 | BYH0300 | CDC25A | -3.34 |
| Â | NM_014427 | BYH0960 | CPNE7 | -3.38 |
| Â | NM_004708 | BYH0646 | PDCD5 | -3.53 |
| Â | NM_005235 | BYH0700 | ERBB4 | -3.63 |
| Â | NM_001702 | BYH0281 | BAI1 | -3.68 |
| Â | NM_005568 | BYH0743 | LHX1 | -3.70 |
| Â | NM_005994 | BYH0787 | TBX2 | -3.78 |
| Â | NM_033016 | BYH1086 | PDGFB | -3.83 |
| Â | NM_001759 | BYH0291 | CCND2 | -3.89 |
| Â | NM_006180 | BYH0803 | NTRK2 | -3.90 |
| Â | NM_000090 | BYH0054 | COL3A1 | -4.00 |
| Â | NM_002051 | BYH0343 | GATA3 | -4.18 |
| Â | NM_001422 | BYH0247 | ELF5 | -4.24 |
| Â | NM_000429 | BYH0117 | MAT1A | -4.32 |
| Â | NM_000633 | BYH0158 | BCL2 | -4.57 |
| Â | NM_000949 | BYH0193 | PRLR | -4.59 |
| Â | NM_014333 | BYH0955 | CADM1 | -4.79 |
| Â | NM_002555 | BYH0402 | SLC22A18 | -5.00 |
| Â | NM_003722 | BYH0533 | TP73L | -5.01 |
| Â | NM_021111 | BYH1039 | RB1 | -5.09 |
| Â | NM_012116 | BYH0906 | CBLC | -5.15 |
| Â | NM_000550 | BYH0139 | TYRP1 | -5.17 |
| Â | AF055033 | BYH0006 | IGFBP5 | -5.52 |
| Â | X52599 | BYH1117 | NGFB | -5.53 |
| Â | NM_000027 | BYH0029 | AGA | -5.54 |
| Â | M35410 | BYH0025 | IGFBP2 | -5.59 |
| Â | NM_003486 | BYH0521 | SLC7A5 | -5.75 |
| Â | NM_018684 | BYH1015 | KIAA1166 | -6.08 |
| Â | NM_000362 | BYH0102 | TIMP3 | -6.14 |
| Â | NM_004378 | BYH0600 | CRABP1 | -6.79 |
| Â | NM_005410 | BYH0726 | SEPP1 | -6.79 |
| Â | NM_001719 | BYH0284 | BMP7 | -6.83 |
| Â | NM_003282 | BYH0499 | TNNI2 | -7.06 |
| Â | NM_004048 | BYH0570 | B2M | -7.07 |
| Â | NM_003177 | BYH0473 | SYK | -7.18 |
| Â | NM_004561 | BYH0622 | OVOL1 | -7.20 |
| Â | NM_000609 | BYH0154 | CXCL12 | -8.3 |