Brain tissues | Correcting consistent transcripts only | Correcting HG-U133_AB and HG-U133_Plus2.0 data independently | Inter-chip coherence of RNA quality profiles | ||
---|---|---|---|---|---|
 | Increased | Decreased | Increased | Decreased |  |
Brodmann area 35 | 684 | 715 | 1355 | 2467 | 0,67 |
Caudate nucleus | 544 | 688 | 1062 | 2164 | 0,48 |
Nucleus ambiguus | 849 | 1367 | 754 | 2924 | 0,79 |
Nucleus basalis * | 1013 | 526 | 1690 | 3089 | 0,01 * |
Pulvinar * | 675 | 442 | 1301 | 2401 | -0,11 * |
Putamen | 962 | 1331 | 729 | 3390 | 0,74 |
Reticular formation | 385 | 389 | 865 | 2329 | 0,37 |
Septal area | 1185 | 2698 | 1175 | 6587 | 0,80 |
Substantia nigra * | 685 | 257 | 808 | 1935 | -0,13 * |
Subthalamic nucleus | 588 | 704 | 1454 | 3771 | 0,43 |