From: Semantically linking and browsing PubMed abstracts with gene ontology
GO term | Positives | TP | FP | TPF | FPF |
---|---|---|---|---|---|
mitochondrion inheritance | 10 | 6 | 4 | 0.6 | 0.005442177 |
mitochondrial genome maintenance | 29 | 9 | 6 | 0.6 | 0.008219178 |
reproduction | 9 | 7 | 2 | 0.777777778 | 0.002717391 |
biological process unknown | 13 | 6 | 7 | 0.461538462 | 0.009562842 |
ribosomal chaperone activity | 10 | 2 | 8 | 0.2 | 0.010884354 |
high affinity zinc uptake transporter activity | 20 | 8 | 7 | 0.533333333 | 0.009589041 |
low-affinity zinc ion transporter activity | 7 | 3 | 4 | 0.428571429 | 0.005420054 |
thioredoxin | 19 | 0 | 15 | 0 | 0.020547945 |
alpha-1,6-mannosyltransferase activity | 10 | 3 | 7 | 0.3 | 0.00952381 |
trans-hexaprenyltranstransferase activity | 13 | 0 | 13 | 0 | 0.017759563 |
vacuole inheritance | 10 | 7 | 3 | 0.7 | 0.004081633 |
single strand break repair | 18 | 4 | 11 | 0.266666667 | 0.015068493 |
single-stranded DNA specific | 7 | 5 | 2 | 0.714285714 | 0.002710027 |
phosphopyruvate hydratase complex | 10 | 0 | 10 | 0 | 0.013605442 |
lactase activity | 11 | 8 | 3 | 0.727272727 | 0.004087193 |
alpha-glucoside transport | 17 | 3 | 12 | 0.2 | 0.016438356 |
regulation of DNA recombination | 30 | 13 | 2 | 0.866666667 | 0.002739726 |
regulation of mitotic recombination | 34 | 9 | 6 | 0.6 | 0.008219178 |
negative regulation of recombination | 19 | 6 | 9 | 0.4 | 0.012328767 |
mitotic spindle elongation | 10 | 2 | 8 | 0.2 | 0.010884354 |
maltose metabolism | 7 | 4 | 3 | 0.571428571 | 0.004065041 |
maltose biosynthesis | 9 | 0 | 9 | 0 | 0.012228261 |
maltose catabolism | 16 | 13 | 2 | 0.866666667 | 0.002739726 |
alpha-1,2-mannosyltransferase activity | 17 | 0 | 15 | 0 | 0.020547945 |
ribosomal large subunit assembly | 22 | 4 | 11 | 0.266666667 | 0.015068493 |
ribosomal small subunit assembly | 10 | 1 | 9 | 0.1 | 0.012244898 |
mannosyltransferase activity | 26 | 9 | 6 | 0.6 | 0.008219178 |
mannosylphosphate transferase activity | 14 | 5 | 9 | 0.357142857 | 0.012311902 |
cell wall mannoprotein biosynthesis | 12 | 6 | 6 | 0.5 | 0.008185539 |
alpha-1,3-mannosyltransferase activity | 7 | 4 | 3 | 0.571428571 | 0.004065041 |
adenine deaminase activity | 23 | 9 | 6 | 0.6 | 0.008219178 |
acyl binding | 21 | 7 | 8 | 0.466666667 | 0.010958904 |
acyl carrier activity | 7 | 6 | 1 | 0.857142857 | 0.001355014 |
very-long-chain fatty acid metabolism | 24 | 4 | 11 | 0.266666667 | 0.015068493 |
plasma membrane long-chain | 12 | 7 | 5 | 0.583333333 | 0.006821282 |
low affinity iron ion transport | 7 | 0 | 7 | 0 | 0.009485095 |
transition metal ion transport | 32 | 7 | 8 | 0.466666667 | 0.010958904 |
protein targeting to Golgi | 17 | 2 | 13 | 0.133333333 | 0.017808219 |
ascorbate stabilization | 17 | 0 | 15 | 0 | 0.020547945 |
autophagic vacuole formation | 21 | 6 | 9 | 0.4 | 0.012328767 |
autophagic vacuole fusion | 14 | 3 | 11 | 0.214285714 | 0.01504788 |
Rieske iron-sulfur protein | 17 | 1 | 14 | 0.066666667 | 0.019178082 |
peptidyltransferase activity | 31 | 11 | 4 | 0.733333333 | 0.005479452 |
tRNA binding | 14 | 2 | 12 | 0.142857143 | 0.016415869 |
urea cycle | 9 | 0 | 9 | 0 | 0.012228261 |
urea cycle intermediate metabolism | 31 | 6 | 9 | 0.4 | 0.012328767 |
citrulline metabolism | 10 | 0 | 10 | 0 | 0.013605442 |
argininosuccinate metabolism | 11 | 0 | 11 | 0 | 0.014986376 |
ribosome export from nucleus | 11 | 9 | 2 | 0.818181818 | 0.002724796 |
ribosomal large subunit export | 17 | 13 | 2 | 0.866666667 | 0.002739726 |
ribosomal small subunit export | 9 | 1 | 8 | 0.111111111 | 0.010869565 |
citrulline metabolism | 10 | 0 | 10 | 0 | 0.013605442 |
argininosuccinate metabolism | 11 | 0 | 11 | 0 | 0.014986376 |
protein import into nucleus, docking | 13 | 5 | 8 | 0.384615385 | 0.010928962 |
protein import into nucleus, translocation | 18 | 0 | 15 | 0 | 0.020547945 |
protein import into nucleus, substrate release | 9 | 6 | 3 | 0.666666667 | 0.004076087 |
acyl-CoA binding | 8 | 3 | 5 | 0.375 | 0.006784261 |
L-ornithine transporter activity | 7 | 5 | 2 | 0.714285714 | 0.002710027 |
mitochondrial ornithine transport | 29 | 7 | 8 | 0.466666667 | 0.010958904 |