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Table 5 Nucleotide variation at 676 merged nuclear ( n DNA) contigs in the pine species

From: Comparative transcriptomics of a complex of four European pine species

Species

N

L

SNPs

Sing.

Ï€ tot

D

P. sylvestris

5

1364676

12920

8674

0.0044

−0.243

P. mugo

5

1364676

13129

8710

0.0045

−0.221

P. uncinata

4

1364676

13420

10374

0.0053

−0.169

P. uliginosa

3

1364676

9581

9581

0.0047

-

Total/Aver.

17

1364676

27929

12181

0.0047

−0.211

  1. N- number of samples analysed; L – length of the sequences in base pairs; SNPs- number of polymorphic sites detected; Sing – number of singleton mutations; πtot – total nucleotide diversity (Nei [31]); D – multilocus Tajima’s D statistics [32].