From: Genome assembly using Nanopore-guided long and error-free DNA reads
1D reads | 2D reads | ||
---|---|---|---|
MinION® reads | |||
aligned using LAST | # reads | 57,911 | 8,581 |
# reads (>10Kb) | 3,609 | 3,866 | |
Cumulative size (Mbp) | 118.9 | 86.1 | |
Average size (bp) | 2,052 | 10,033 | |
N50 size (bp) | 11,058 | 12,141 | |
Max size (bp) | 123,135 | 58,704 | |
Aligned reads | 9,623 (16.6%) | 7,140 (83.2%) | |
Mean identity percent | 56.6% | 74.5% | |
Max alignment size | 54,158 | 58,656 | |
Error-free reads | 0 | 0 | |
NaS reads aligned using BWA mem | # reads | 4,717 | 6,558 |
# reads (>10Kb) | 167 | 3,045 | |
Cumulative size (Mbp) | 17.2 | 65.6 | |
Average size (bp) | 3,639 | 10,008 | |
N50 size (bp) | 4,273 | 12,685 | |
Max size (bp) | 31,283 | 59,863 | |
Aligned reads | 4,717 (100%) | 6,558 (100%) | |
Mean identity percent | 99.9937% | 99,9893% | |
Max alignment size | 31,283 | 59,863 | |
Error-free reads | 4,620 (97.9%) | 6,307 (96.2%) |