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Table 3 Changes in abundance of transcripts involved in GA biosynthesis, catabolism and signaling

From: Glyphosate’s impact on vegetative growth in leafy spurge identifies molecular processes and hormone cross-talk associated with increased branching

Category

Gene ID Abv.

Gene ID

log2 FC

TAIR ID

Component number

GA biosynthesis

GA3OX1

GIBBERELLIN 3-OXIDASE 1

−2.73

AT1G15550.1

comp57360_c0

 

KO/CYP701A3

ENT-KAURENE OXIDASE 1

1.09

AT5G25900.1

comp77748_c0

 

KS

ENT-KAURENE SYNTHASE

1.38

AT1G79460.1

comp72406_c0

GA catabolism

GA2OX1

GIBBERELLIN 2-OXIDASE 1

−1.38

AT1G78440.1

comp70621_c1

 

GA2OX2

GIBBERELLIN 2-OXIDASE 2

2.07

AT1G30040.1

comp72361_c0

 

GA2OX4

GIBBERELLIN 2-OXIDASE 4

3.20

AT1G02400.1

comp67827_c0

 

GA2OX4

GIBBERELLIN 2-OXIDASE 4

1.33

AT1G02400.1

comp76771_c0

GA mediated

GASA6

GA-STIMULATED ARABIDOPSIS 6

3.50

AT1G74670.1

comp69402_c0

signaling

GASA9

GA-STIMULATED ARABIDOPSIS 9

2.10

AT1G22690.3

comp64133_c0

 

GASA11

GA-STIMULATED ARABIDOPSIS 11

−1.02

AT2G18420.1

comp74978_c0

 

SCL14

SCARECROW-LIKE 14

−1.52

AT1G07530.1

comp81394_c0

 

SCL28

SCARECROW-LIKE 28

2.11

AT1G63100.1

comp83623_c0

 

SCL32

SCARECROW-LIKE 32

1.18

AT3G49950.1

comp65814_c0

 

SCR

SCARECROW

1.41

AT3G54220.1

comp80927_c1

 

SHR

SHORT ROOT

1.85

AT4G37650.1

comp70203_c1

  1. Transcript changes after foliar glyphosate treatment (2.24 kg ha−1) compared to controls in aerial tissues derived from crown buds of leafy spurge. The Arabidopsis Information Resource was used to annotate homologs of leafy spurge transcripts (TAIR ID), to obtain gene IDs and abbreviations (Abv.); values represent log2 fold changes (FC)