Table 1 Summary of expressed sequence tags (ESTs) from the four origins
From: EST-based in silico identification and in vitro test of antimicrobial peptides in Brassica napus
species | No. of sequences generated | No. of high-quality sequences | No. of unigenes | Hit to No. of AMPs (%) |
|---|---|---|---|---|
B. napus from PlantGDB EST | 644,998 | 632,919 | 145,002 | 705(0.49Â %) |
B. napus leaf | 35,788 | 35,756 | 20,587 | 237(1.15Â %) |
B. napus (High oil content) seed | 78,332 | 69,938 | 21,712 | 19(0.09Â %) |
B. napus (Low oil content) seed | 57,870 | 50,656 | 13,899 | 11(0.09Â %) |
Total | 816,988 | 789,269 | 201,200 | Â |