High-throughput mRNA and miRNA profiling of epithelial-mesenchymal transition in MDCK cells

BMC Genomics

Table 2 miRNAs differentially expressed during EMT in MDCK cells: Comparison of miRNAs detected in two independent screens. Left column: Common miRNAs detected by microarray in [33] and by NGS in our study; right column: miRNAs detected exclusively by NGS

Common miRNAs detected on miRNA array and by NGS:		miRNAs detected exclusively by NGS:
MDCK	MDCK-Ras	MDCK	MDCK-Ras
miR-9	miR-129	miR-10a	let-7e
miR-25	miR-132	miR-26a	miR-1
miR-92a	miR-152	miR-30a	miR-21
miR-95	miR-155	miR-126	miR-24
miR-96	miR-224	miR-147	miR-27a
miR-141	miR-340	miR-153	miR-27b
miR-182	miR-411	miR-192	miR-29a
miR-183	miR-455	miR-194	miR-29b
miR-200a	miR-574	miR-301a	miR-30b
miR-200b		miR-345	miR-99b
miR-200c		miR-429	miR-107
miR-203		miR-450a	miR-125a
miR-330		miR-450b	miR-133c
miR-375		miR-454	miR-134
miR-486		miR-503	miR-146a
		miR-675-3p	miR-181a
		miR-802	miR-181b
		miR-1307	miR-181c
		miR-1388-3p	miR-181d
		miR-1388-5p	miR-197
		miR-1844	miR-222
		miR-3605-5p	miR-299
		miR-7689-3p	miR-365
		miR-8826	miR-378
			miR-379
			miR-380
			miR-381
			miR-485
			miR-494
			miR-582
			miR-874
			miR-889
			miR-8859a

ISSN: 1471-2164