| FAT | MILK | PROTEIN |
---|
Analytical Modelb
| Red Hol | Aust Red | Red Hol | Aust Red | Red Hol | Aust Red |
---|
BayesR 800 K | 0.565 (0.001) | 0.344 (0.003) | 0.650 (0.001) | 0.317 (0.003) | 0.603 (0.001) | 0.200 (0.001) |
BayesR SEQ | 0.572 (0.001) |
0.354 (0.004) | 0.663 (0.002) | 0.308 (0.005) | 0.612 (0.001) | 0.220 (0.003) |
BayesRC Lact |
0.576 (0.002) | 0.353 (0.002) |
0.664 (0.001) |
0.325 (0.004) |
0.616 (0.001) |
0.226 (0.003) |
BayesRC RLact | 0.571 (0.001) | 0.352 (0.002) | 0.657 (0.001) | 0.302 (0.005) | 0.612 (0.001) | 0.218 (0.002) |
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aEstimated as the average correlation between the genomic prediction and corrected phenotypes. The highest accuracy is in bold font in each column. Numbers in in brackets indicate relative convergence of 5 independent Bayesian MCMC chains (estimated from [SD of the mean accuracy]/√5). Note: the numbers in brackets should not be interpreted as a “standard error” because they are estimated from 5 Bayesian MCMC chains run on the same data set
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bBayesR models used either 800 K SNP array (600,640 genotypes) or 994,019 sequence variants (SEQ). The BayesRC model definitions are given in Table 2