Table 2 Basic assembly statistics and information for contigs in three An. arabiensis assemblies
From: Evaluation of DISCOVAR de novo using a mosquito sample for cost-effective short-read genome assembly
Basic assembly statistics for contigs of three An. arabiensis assemblies | ||||||
|---|---|---|---|---|---|---|
Assembly | # Contigs | Contig N50 (bp) | Contig N90 (bp) | Mean Contig Length (bp) | Max Contig Length (bp) | Total Contig Length (bp) |
AaraD1 | 10,179 | 74,117 | 10,908 | 20,772 | 819,682 | 211,443,117 |
Ddn-Anara | 29,408 | 20,645 | 3060 | 8364 | 271,474 | 245,971,991 |
Ddn-Anara, trimmed at 2 kb | 20,007 | 22,433 | 4364 | 11,631 | 271,474 | 232,710,450 |