Table 8 Comparison of cancer2000 prediction results between CL and 7 alternative cross platform normalization algorithm
From: CrossLink: a novel method for cross-condition classification of cancer subtypes
Cancer2000 class | Class 2 | Class 3 | Class 5 ER- | Class 5 Her 2 | Class 6 Luminal | Class 6 ER+ |
|---|---|---|---|---|---|---|
CL | 36/41 | 24/26 | 20/28 | 21/28 | 24/26 | 26/26 |
EB | 8/10 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 |
GQ | 37/69 | 75/126 | 4/4 | 0/4 | 20/23 | 21/23 |
DWD | 98/111 | 52/105 | 14/15 | 0/15 | 19/24 | 19/24 |
XPN | 8/10 | 0/0 | 0/0 | 0/0 | 0/0 | 0/0 |
DisTran | 0/0 | 256/256 | 0/0 | 0/0 | 0/1 | 0/1 |
MRS | 0/0 | 29/68 | 0/0 | 0/0 | 0/0 | 0/0 |
QD | 2/3 | 1/11 | 0/0 | 0/0 | 0/0 | 0/0 |