Table 1 Mouse transcripts as predicted by human transcripts
From: Assisted transcriptome reconstruction and splicing orthology
Predictions | 10/2006 | 01/2011 | 07/2015 | ||
|---|---|---|---|---|---|
C 1 | C 2 | C 3 | All | ||
a | Splicing orthologs | 7 307 | 3 000 | 815 | 11 122 |
b | Confirmed yet-to-be-found | 1 332 | 1 631 | 3 006 | 5 969 |
c | Confirmed human-specific | 1 644 | 1 793 | 2 637 | 6 074 |
Unresolved | 612 | 294 | 112 | 1018 | |
d | Total number of analyzed transcripts | 11 002 | 6 797 | 6 583 | 24 382 |
b/d | Proportion of yet-to-be-found transcripts | 0.12 | 0.24 | 0.46 | 0.24 |
c/d | Proportion of human-specific transcripts | 0.15 | 0.26 | 0.4 | 0.25 |
Mouse reality | |||||
e | Splicing orthologs, by mouse cohorts | 7 024 | 3 454 | 644 | 11 122 |
f | Known mouse transcripts | 9 486 | 6 348 | 2 075 | 17 909 |
Statistics | |||||
a/(a+b) | Precision | 0.85 | 0.65 | 0.21 | 0.65 |
e/f | Recall | 0.74 | 0.54 | 0.31 | 0.62 |