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Fig. 3 | BMC Genomics

Fig. 3

From: Genome-wide gene expression and RNA half-life measurements allow predictions of regulation and metabolic behavior in Methanosarcina acetivorans

Fig. 3

Breakdown of Differentially Expressed Genes. Breakdown of differentially expressed genes (DEG) comparing MeOH/Acetate (orange), MeOH/TMA (purple) and TMA/Acetate (cyan) by (a) COG class and (b) metabolic subsystem (metabolic genes include those that are associated with reactions in the metabolic model iST807). The outliers in (a) include coenzyme/vitamin metabolism (H) and translation and ribosome biogenesis (J) when comparing MeOH and TMA. The inset in a shows the count of DEG in each category. The inset in (a) shows the count of DEG in each category. Genes with a p-value ≤ 0.01 were considered to be differentially expressed

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BMC Genomics

ISSN: 1471-2164

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