From: STR-realigner: a realignment method for short tandem repeat regions
Period | No. of regions | STR-realigner | ReviSTER | IndelRealigner | --realign option | Original BAM |
---|---|---|---|---|---|---|
1 | 5345 | 1.104 | 1.054 | 4.148 | 4.181 | 4.152 |
2 | 1160 | 2.638 | 2.679 | 5.454 | 5.762 | 5.477 |
3 | 517 | 2.778 | 2.746 | 4.818 | 4.768 | 4.818 |
4 | 1433 | 2.651 | 2.631 | 5.386 | 5.398 | 5.406 |
5 | 668 | 2.301 | 2.114 | 6.617 | 6.660 | 6.617 |
6 | 472 | 3.137 | 3.178 | 6.071 | 5.936 | 6.094 |
Total | 9595 | 1.959 | 1.933 | 4.861 | 4.914 | 4.870 |