Fig. 1
From: ChimPipe: accurate detection of fusion genes and transcription-induced chimeras from RNA-seq data
Two types of RNA-seq reads for chimera detection. This picture shows a chimeric transcript (bottom) made from exons of two genes, A and B, depicted in blue and red respectively (top). This chimeric transcript is supported by two types of reads: a split-read and a discordant paired-end read, that we depict aligned both on the genome (middle-top) and on the transcriptome (middle-bottom). The chimeric junction position on the transcriptome is highlighted by a yellow star both in the split-read and in the chimeric transcript