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Table 2 Basic information of differential expression growth genes among the triploid hybrids and its parents

From: Determination of dosage compensation and comparison of gene expression in a triploid hybrid fish

Categories

Ensembl protein id

BSB-RPKM

GB-RPKM

GC-RPKM

Symbols

Go term name

Go term accession

IX

ENSDARP00000003167

1.28

0.05

0.09

cds2

positive regulation of vascular endothelial growth factor signaling pathway

GO:1900748

XI

ENSDARP00000074846

10.44

4.68

2.00

foxj2

vascular endothelial growth factor receptor signaling pathway, regulation of organ growth

GO:0048010, GO:0046620

XI

ENSDARP00000013686

4.94

1.97

0.59

bmp2a

growth, growth factor activity

GO:0040007, GO:0008083

III

ENSDARP00000072198

6.95

1.36

3.51

bambia

transforming growth factor beta-activated receptor activity

GO:0005024

IV

ENSDARP00000023951

2.24

8.00

3.67

insra

developmental growth

GO:0048589

IX

ENSDARP00000102655

2.97

1.31

1.07

sall1a

positive regulation of fibroblast growth factor receptor signaling pathway

GO:0045743

I

ENSDARP00000011459

2.40

0.16

0.42

ppm1bb

negative regulation of transforming growth factor beta receptor signaling pathway

GO:0030512

IX

ENSDARP00000003654

9.23

0.88

0.57

fgf13b

growth factor activity

GO:0008083

XII

ENSDARP00000106837

0.15

1.88

5.17

suv420h2

regulation of multicellular organism growth

GO:0040014

XII

ENSDARP00000111890

0.62

2.54

7.51

cyr61l2

regulation of cell growth, insulin-like growth factor binding

GO:0001558, GO:0005520

VIII

ENSDARP00000089039

2.43

1.83

7.18

nrp1b

vascular endothelial growth factor receptor signaling pathway, vascular endothelial growth factor signaling pathway, regulation of vascular endothelial growth factor receptor signaling pathway, growth factor binding, vascular endothelial growth factor-activated receptor activity

GO:0048010, GO:0038084, GO:0030947, GO:0019838, GO:0005021

VIII

ENSDARP00000091440

2.78

2.76

7.82

skia

negative regulation of transforming growth factor beta receptor signaling pathway

GO:0030512

XII

ENSDARP00000110575

0.48

1.19

5.87

vegfaa

vascular endothelial growth factor receptor signaling pathway, growth factor activity

GO:0048010 GO:0008083

VII

ENSDARP00000050533

3.95

2.63

0.71

crim1

regulation of cell growth, insulin-like growth factor binding

GO:0001558 GO:0005520

XI

ENSDARP00000028652

17.97

7.00

2.72

pdgfrb

platelet-derived growth factor receptor signaling pathway, platelet-derived growth factor alpha-receptor activity

GO:0048008 GO:0005018

XI

ENSDARP00000053094

3.57

1.61

0.63

rhbdf1

regulation of epidermal growth factor receptor signaling pathway, growth factor binding

GO:0042058 GO:0019838

III

ENSDARP00000030150

4.56

1.24

6.39

smad1

transforming growth factor beta receptor signaling pathway

GO:0007179

XI

ENSDARP00000052422

5.17

1.31

0.49

spry2

negative regulation of fibroblast growth factor receptor signaling pathway

GO:0040037

VII

ENSDARP00000036006

3.67

2.64

0.89

gna13b

unidimensional cell growth

GO:0009826

IX

ENSDARP00000071913

3.91

1.09

1.44

si:dkey-101 k6.5

transforming growth factor beta receptor signaling pathway, transforming growth factor beta receptor activity, type II

GO:0007179 GO:0005026

III

ENSDARP00000031108

6.34

1.10

3.85

smad9

transforming growth factor beta receptor signaling pathway

GO:0007179

XII

ENSDARP00000002466

0.20

2.85

6.13

flt1

vascular endothelial growth factor receptor signaling pathway, vascular endothelial growth factor-activated receptor activity

GO:0048010 GO:0005021

IX

ENSDARP00000032226

8.98

3.64

3.80

extl3

positive regulation of fibroblast growth factor receptor signaling pathway

GO:0045743

X

ENSDARP00000007058

1.31

3.00

4.18

gpc4

unidimensional cell growth

GO:0009826

IV

ENSDARP00000019643

23.24

54.31

25.38

igfbp2b

regulation of cell growth, insulin-like growth factor binding

GO:0001558 GO:0005520

VIII

ENSDARP00000039831

2.31

2.47

6.37

tgfbr2

transforming growth factor beta receptor signaling pathway, transforming growth factor beta receptor activity, type II

GO:0007179 GO:0005026

VI

ENSDARP00000057368

0.02

4.36

2.07

igfbp5a

regulation of cell growth, insulin-like growth factor binding

GO:0001558 GO:0005520

IX

ENSDARP00000060763

8.41

2.71

2.02

spred1

regulation of vascular endothelial growth factor receptor signaling pathway

GO:0030947

VII

ENSDARP00000076657

5.77

5.22

1.11

gdf2

growth, growth factor activity

GO:0040007 GO:0008083

IX

ENSDARP00000076455

5.53

1.00

1.56

fgf19

growth factor activity

GO:0008083

XII

ENSDARP00000018513

0.32

1.72

7.99

mdkb

growth factor activity

GO:0008083

IX

ENSDARP00000096601

10.28

3.34

2.55

insrb

developmental growth

GO:0048589

VII

ENSDARP00000047568

30.01

25.43

11.67

igf2b

forebrain development, fin regeneration, insulin-like growth factor receptor binding, growth factor activity

GO:0005159 GO:0008083 GO:0030900 GO:0031101

IX

ENSDARP00000025519

5.09

1.37

1.12

tgfb3

growth, transforming growth factor beta receptor signaling pathway, cell growth, growth factor activity, transforming growth factor beta receptor binding

GO:0040007 GO:0007179 GO:0016049 GO:0008083 GO:0005160

II

ENSDARP00000056452

0.06

0.01

17.17

igfbp1b

regulation of cell growth, insulin-like growth factor binding, insulin-like growth factor I binding, insulin-like growth factor II binding

GO:0001558 GO:0005520 GO:0031994 GO:0031995

VIII

ENSDARP00000058288

2.73

3.92

8.08

dusp22b

transforming growth factor beta receptor signaling pathway

GO:0007179

X

ENSDARP00000076869

1.53

3.92

4.53

tgif1

regulation of transforming growth factor beta receptor signaling pathway

GO:0017015

VIII

ENSDARP00000103673

1.63

2.82

8.90

rabep1

growth factor activity

GO:0008083

IV

ENSDARP00000017449

21.24

53.65

19.72

igf1

growth factor activity, insulin-like growth factor receptor binding

GO:0008083 GO:0005159

XI

ENSDARP00000032935

3.94

1.69

0.73

ctnnb1

positive regulation of fibroblast growth factor receptor signaling pathway

GO:0045743

III

ENSDARP00000075360

5.09

2.16

6.13

fgfr2

fibroblast growth factor receptor signaling pathway, fibroblast growth factor-activated receptor activity

GO:0008543 GO:0005007

VIII

ENSDARP00000008469

1.43

1.84

7.07

bmpr2b

transforming growth factor beta-activated receptor activity

GO:0005024

X

ENSDARP00000014981

1.46

3.34

6.61

pink1

regulation of vascular endothelial growth factor signaling pathway

GO:1900746

VII

ENSDARP00000069999

0.67

0.65

0.09

gdf6a

growth, growth factor activity

GO:0040007 GO:0008083

X

ENSDARP00000024277

5.83

18.91

19.20

smad7

transforming growth factor beta receptor signaling pathway

GO:0007179