Fig. 5
From: An improved genome assembly uncovers prolific tandem repeats in Atlantic cod
The density of TRs in genome assemblies, promoters and coding regions. The assemblies shown here are from Ensembl release 81, excluding gadMor1, plus a human genome based on PacBio data, the California sea hare Aplysia californica and gadMor2 (n = 71). The panels show the density (percentage of bases) of TRs in the whole assembly, coding regions and promoter regions, respectively. The human PacBio assembly is not included in the gene and promoter analysis because it has no annotation, and the opossum is lacking for technical limitations. The species marked are Oc (Ochotona princeps, pika), Hs (Homo sapiens, human), Hs(PB) (Homo sapiens, human, PacBio based assembly), Cf (Canis familiaris, dog), Do (Dipodomys ordii, kangaroo rat), Xt (Xenopus tropicalis, frog), Pf (Poecilia formosa, Amazon molly), Dr (Danio rerio, zebrafish), Pm (Petromyzon marinus, lamprey), Sc (Saccharomyces cerevisiae, yeast), Ac (Aplysia californica, California sea hare) and Gm (Gadus morhua, Atlantic cod, gadMor2)