Using the entrapment sequence method as a standard to evaluate key steps of proteomics data analysis process

BMC Genomics

Table 1 Construction of the target database for Pfu and LM3 datasets

DataSets	Sample sequences	Entrapment sequences	Sample tryptic peptides	Entrapment tryptic peptides	Shared tryptic peptide	Shared/Sample tryptic peptides (%)
Pfu	Pfu2045	Homo20187	145358	2338004	102	0.070
LM3	Homo20187	Arc208250	2338004	15344503	4864	0.208
LM3	Homo20187	Arc20825	2338004	1479773	1333	0.057

ISSN: 1471-2164