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Table 2 Evaluation of the expression profile variation between RNA-Seq and RT-qPCR for the selected miRNAs

From: High-throughput sequencing of pituitary and hypothalamic microRNA transcriptome associated with high rate of egg production

Tissue

miRNA

Fold change (HP/LP)

P-value

RNA-Seq

RT-qPCR

RNA-Seq

RT-qPCR

pituitary

gga-miR-1744-3p

0.32

0.66

0.0296

0.0279

 

gga-miR-122-5p

0.26

0.23

0.0039

0.0095

 

gga-miR-1434

0.42

0.28

0.0464

0.0229

 

gga-miR-99a-5p

0.87

0.78

0.6680

0.1060

 

gga-miR-26a-5p

0.84

0.63

0.5370

0.2780

 

gga-miR-34b-3p

3.34

3.53

0.0377

0.0477

 

gga-miR-34c-3p

3.86

3.39

0.0362

0.0401

 

gga-miR-1684a-3p

30.57

31.12

0.0004

0.0010

hypothalamus

gga-miR-1744-3p

0.15

0.23

0.0021

0.0064

 

gga-miR-34b-3p

0.16

0.22

0.0023

0.0012

 

gga-miR-34c-3p

0.18

0.14

0.0004

0.0062

 

gga-miR-99a-5p

1.34

1.31

0.3620

0.0685

 

gga-miR-26a-5p

1.19

0.69

0.5430

0.2510

 

gga-miR-122-5p

7.41

6.63

0.0021

0.0005

 

gga-miR-1434

4.99

4.35

0.0018

0.0211

 

gga-miR-1684a-3p

24.47

26.81

0.0037

0.0006