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Fig. 4 | BMC Genomics

Fig. 4

From: Comparative analysis of the predicted secretomes of Rosaceae scab pathogens Venturia inaequalis and V. pirina reveals expanded effector families and putative determinants of host range

Fig. 4

Predicted proteins present in the VIS set from the secretome of Venturia inaequalis isolate Vi1. Annotations were based on gene ontology analysis including interrogation of NCBI RefSeq [168], InterPro [169], UniRef [170], ExPASy UniProtKB/Swiss-Prot [171] and ExPASy Prosite [172], CAZyme identification using the CAT server [27] and BLASTp searches against the NCBI non-redundant database [29]. Small secreted proteins (SSPs) include predicted proteins with similarity to known effectors and proteins with no known function, either with or without putative conserved motifs identified by PfamScan [36,37,38]. The order of the categories in the legend is the same as that in the chart

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BMC Genomics

ISSN: 1471-2164

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