Table 2 Codon usage in T. multiceps genes
From: Analysis of transcriptome data reveals multifactor constraint on codon usage in Taenia multiceps
AA | Codon | N | RSCU | AA | Codon | N | RSCU |
|---|---|---|---|---|---|---|---|
Ala | GCU | 66571 | 1.26 | Leu | UUG | 54091 | 1.13 |
GCC | 60219 | 1.14 | CUU | 62280 | 1.30 | ||
GCA | 46898 | 0.89 | CUC | 66010 | 1.37 | ||
GCG | 37647 | 0.71 | CUA | 28125 | 0.59 | ||
Arg | CGU | 41703 | 1.44 | CUG | 57257 | 1.19 | |
CGC | 36670 | 1.27 | Lys | AAA | 66198 | 0.90 | |
CGA | 34400 | 1.19 | AAG | 80146 | 1.10 | ||
CGG | 21406 | 0.74 | Phe | UUU | 56781 | 0.97 | |
AGA | 20593 | 0.71 | UUC | 56843 | 1.03 | ||
AGG | 18942 | 0.65 | Pro | CCU | 38993 | 1.11 | |
Asn | AAU | 61374 | 1.07 | CCC | 38260 | 1.09 | |
AAC | 53482 | 0.93 | CCA | 37916 | 1.08 | ||
Asp | GAU | 83678 | 1.10 | CCG | 25730 | 0.73 | |
GAC | 67932 | 0.90 | Ser | UCU | 41504 | 1.13 | |
Cys | UGU | 28391 | 0.99 | UCC | 43482 | 1.18 | |
UGC | 29110 | 1.01 | UCA | 36776 | 1.00 | ||
Gln | CAA | 51821 | 0.95 | UCG | 33005 | 0.89 | |
CAG | 57603 | 1.05 | AGU | 35197 | 0.95 | ||
Glu | GAA | 86515 | 0.92 | AGC | 31355 | 0.85 | |
GAG | 101456 | 1.08 | Thr | ACU | 44571 | 1.17 | |
Gly | GGU | 56752 | 1.41 | ACC | 43688 | 1.14 | |
GGC | 45893 | 1.14 | ACA | 36206 | 0.95 | ||
GGA | 37411 | 0.93 | ACG | 28553 | 0.75 | ||
GGG | 21005 | 0.52 | Tyr | UAU | 33694 | 0.82 | |
His | CAU | 31625 | 0.95 | UAC | 48161 | 1.18 | |
CAC | 34908 | 1.05 | Val | GUU | 55062 | 1.19 | |
Ile | AUU | 65463 | 1.32 | GUC | 47059 | 1.02 | |
AUC | 56412 | 1.14 | GUA | 23416 | 0.51 | ||
AUA | 26796 | 0.54 | GUG | 59224 | 1.28 | ||
Leu | UUA | 20522 | 0.43 |