Response of turkey muscle satellite cells to thermal challenge. I. transcriptome effects in proliferating cells

Reed, Kent M.; Mendoza, Kristelle M.; Abrahante, Juan E.; Barnes, Natalie E.; Velleman, Sandra G.; Strasburg, Gale M.

doi:10.1186/s12864-017-3740-4

BMC Genomics

Table 3 Summary of Wnt family gene expression observed in thermally challenged turkey muscle satellite cells

From: Response of turkey muscle satellite cells to thermal challenge. I. transcriptome effects in proliferating cells

		33R vs 38R			33F vs 38F			43R vs 38R			43F vs 38F
Locus	Description		Log₂FC	FDR pval		Log₂FC	FDR pval		Log₂FC	FDR pval		Log₂FC	FDR pval
LOC104916364	protein Wnt-1	↓	−2.393	NS	↓	−2.339	NS	↓	−2.172	NS	↓	−2.333	NS
LOC104916471	protein Wnt-1-like	-	0.000	NS	↓	−2.339	NS	-	0.000	NS	↓	−2.333	NS
LOC104917060	protein Wnt-1-like	-	0.000	NS	-	0.000	NS	-	0.000	NS	-	0.000	NS
WNT2	wingless-type MMTV integration site family member 2	↑	2.259	NS	-	0.000	NS	↑	2.493	NS	-	0.000	NS
WNT2b	wingless-type MMTV integration site family, member 2B	↑	1.310	0.0316	↓	−1.087	NS	↑	1.163	NS	↓	−0.971	NS
WNT3	wingless-type MMTV integration site family, member 3	-	0.000	NS	↑	2.305	NS	-	0.000	NS	-	0.000	NS
WNT3a	wingless-type MMTV integration site family, member 3A	↑	5.942	0.0003	↑	4.237	1.04E-05	-	0.000	NS	↓	−2.336	NS
WNT4	wingless-type MMTV integration site family, member 4	↓	−0.940	0.0000	↓	−1.598	7.64E-53	↓	−2.552	6.89E-28	↓	−1.880	1.3E-57
WNT5a	wingless-type MMTV integration site family, member 5A	↑	0.007	NS	↑	0.499	NS	↑	0.398	NS	↓	−0.350	NS
WNT5b	wingless-type MMTV integration site family, member 5B	↓	−0.997	1.3E-17	↓	−1.388	2.4E-28	↓	−1.583	7.94E-09	↓	−1.996	1.11E-43
WNT6	wingless-type MMTV integration site family, member 6	↓	−0.990	NS	↓	3.150	NS	↑	0.885	NS	↑	5.477	0.0109
WNT7a	wingless-type MMTV integration site family, member 7A	↓	−0.159	NS	↓	−1.806	NS	↑	1.596	NS	↑	4.528	3.93E-19
WNT7b	wingless-type MMTV integration site family, member 7B	-	0.000	NS	-	0.000	NS	-	0.000	NS	-	0.000	NS
WNT8a	wingless-type MMTV integration site family, member 8A	-	0.000	NS	-	0.000	NS	-	0.000	NS	-	0.000	NS
WNT8b	wingless-type MMTV integration site family, member 8B	↑	0.462	NS	↑	0.472	NS	↓	−1.092	NS	↓	−0.035	NS
WNT9a	wingless-type MMTV integration site family, member 9A	↑	2.382	NS	↑	5.707	0.0013	↓	−2.172	NS	-	0.000	NS
WNT9b	wingless-type MMTV integration site family, member 9B	-	0.000	NS	-	0.000	NS	-	0.000	NS	-	0.000	NS
WNT10a	wingless-type MMTV integration site family, member 10A	↓	−0.631	0.0033	↓	−0.218	NS	↑	0.166	NS	↑	0.065	NS
WNT11	wingless-type MMTV integration site family, member 11	-	0.000	NS	-	0.000	NS	-	0.000	NS	-	0.000	NS
LOC100538380	protein Wnt-11b-like	-	0.000	NS	-	0.000	NS	-	0.000	NS	↑	3.155	NS
WNT16	wingless-type MMTV integration site family, member 16	↑	2.251	NS	-	0.000	NS	-	0.000	NS	-	0.000	NS

Numbers in italics indicate comparisons with significant expression change

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ISSN: 1471-2164

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