Table 3 F. grandifolia transcriptome sequence assembly summary obtained from Newbler
Assembled Contig Sequences | Beech “Resistant” Library | Beech “Non-Resistant” Library | Beech “Combined” Library |
|---|---|---|---|
Aligned Bases (%) | 157,365,926 (83.63%) | 143,162,558 (80.91%) | 314,816,063 (86.23%) |
Aligned Reads (%) | 438,153 (82.04%) | 412,164 (78.90%) | 893,216 (84.54%) |
Number of Contigs, All | 10,690 | 7630 | 16,285 |
Total Contig Bases | 7,845,700 | 4,478,078 | 11,664,012 |
Average Contig Length | 734 | 587 | 716 |
Number of Large Contigs | 7147 | 4018 | 9943 |
Average Large Contig Size | 961 | 875 | 1009 |
N50 Large Contig Size | 1005 | 893 | 1081 |
Largest Contig Size | 4651 | 4336 | 10,681 |