Fig. 3

Assessment of differential regulation of transcripts and proteins. a Genes and transcripts up- and down-regulated at 8 and 24 hpi with NBV. Transcripts were deemed significantly differentially expressed if their q-value (adjusted p-value) < 0.05 and had ≥2-fold change (up or down). Values shown in parenthesis represent the number of differentially expressed transcripts (including redundancy), whereas values shown above represent the number of differentially expressed genes (transcript redundancy removed). b Proteins were assessed as differentially regulated if they had a ≥ 2-fold change (up or down) relative to 0 hpi. The value in parenthesis indicates the total number of proteins differentially expressed, while the value above signifies the number of non-redundant proteins differentially expressed