From: Genome-wide analysis and expression profiling of the HD-ZIP gene family in kiwifruit
Species | Duplicate pairs | Ka | Ks | Ka/Ks | Duplication | Duplication date (Mya) |
---|---|---|---|---|---|---|
A. chinensis | AcHB1/AcHB36 | 0.220 | 1.420 | 0.155 | WGD | 47.33 |
AcHB1/AcHB20 | 0.068 | 0.235 | 0.289 | WGD | 7.85 | |
AcHB2/AcHB27 | 0.334 | 1.698 | 0.197 | WGD | 56.59 | |
AcHB2/AcHB28 | 0.310 | 1.989 | 0.156 | WGD | 66.30 | |
AcHB2/AcHB65 | 0.140 | 0.767 | 0.183 | WGD | 25.58 | |
AcHB2/AcHB13 | 0.138 | 0.852 | 0.162 | WGD | 28.41 | |
AcHB2/AcHB25 | 0.028 | 0.226 | 0.122 | WGD | 7.55 | |
AcHB3/AcHB32 | 0.214 | 0.792 | 0.270 | WGD | 26.40 | |
AcHB3/AcHB24 | 0.072 | 0.198 | 0.366 | WGD | 6.59 | |
AcHB4/AcHB66 | 0.158 | 0.845 | 0.187 | WGD | 28.18 | |
AcHB4/AcHB14 | 0.146 | 1.070 | 0.136 | WGD | 35.66 | |
AcHB5/AcHB7 | 0.072 | 0.185 | 0.392 | WGD | 6.15 | |
AcHB6/AcHB49 | 0.082 | 0.215 | 0.379 | WGD | 7.18 | |
AcHB7/AcHB18 | 0.391 | 2.696 | 0.145 | WGD | 89.85 | |
AcHB10/AcHB19 | 0.041 | 0.194 | 0.212 | WGD | 6.48 | |
AcHB12/AcHB16 | 0.267 | 1.072 | 0.249 | WGD | 35.74 | |
AcHB13/AcHB25 | 0.139 | 0.716 | 0.194 | WGD | 23.86 | |
AcHB26/AcHB29 | 0.069 | 0.158 | 0.435 | WGD | 5.27 | |
AcHB27/AcHB28 | 0.047 | 0.175 | 0.266 | WGD | 5.84 | |
AcHB27/AcHB65 | 0.312 | 1.512 | 0.206 | WGD | 50.41 | |
AcHB27/AcHB13 | 0.299 | 1.929 | 0.155 | WGD | 64.31 | |
AcHB27/AcHB25 | 0.328 | 1.368 | 0.240 | WGD | 45.58 | |
AcHB28/AcHB65 | 0.303 | 1.284 | 0.236 | WGD | 42.81 | |
AcHB28/AcHB13 | 0.298 | 1.443 | 0.206 | WGD | 48.10 | |
AcHB28/AcHB25 | 0.301 | 1.471 | 0.205 | WGD | 49.02 | |
AcHB30/AcHB48 | 0.091 | 0.996 | 0.091 | WGD | 33.20 | |
AcHB30/AcHB58 | 0.089 | 0.957 | 0.093 | WGD | 31.88 | |
AcHB31/AcHB68 | 0.171 | 0.880 | 0.195 | WGD | 29.34 | |
AcHB31/AcHB64 | 0.205 | 2.075 | 0.099 | WGD | 69.17 | |
AcHB31/AcHB70 | 0.016 | 0.126 | 0.129 | WGD | 4.21 | |
AcHB31/AcHB12 | 0.220 | 1.557 | 0.141 | WGD | 51.91 | |
AcHB31/AcHB16 | 0.097 | 0.926 | 0.105 | WGD | 30.85 | |
AcHB32/AcHB24 | 0.226 | 0.773 | 0.292 | WGD | 25.77 | |
AcHB33/AcHB21 | 0.021 | 0.310 | 0.067 | WGD | 10.32 | |
AcHB34/AcHB40 | 0.163 | 2.704 | 0.060 | WGD | 90.12 | |
AcHB35/AcHB7 | 0.461 | 1.435 | 0.321 | WGD | 47.83 | |
AcHB35/AcHB18 | 0.449 | 2.219 | 0.202 | WGD | 73.96 | |
AcHB36/AcHB37 | 0.126 | 0.726 | 0.173 | WGD | 24.19 | |
AcHB36/AcHB59 | 0.130 | 0.688 | 0.189 | WGD | 22.92 | |
AcHB36/AcHB20 | 0.335 | 1.365 | 0.246 | WGD | 45.50 | |
AcHB37/AcHB59 | 0.021 | 0.143 | 0.150 | WGD | 4.75 | |
AcHB37/AcHB20 | 0.247 | 1.550 | 0.159 | WGD | 51.68 | |
AcHB39/AcHB59 | 0.319 | 2.012 | 0.158 | WGD | 67.05 | |
AcHB39/AcHB22 | 0.043 | 0.268 | 0.161 | WGD | 8.94 | |
AcHB40/AcHB44 | 0.066 | 0.793 | 0.083 | WGD | 26.44 | |
AcHB40/AcHB50 | 0.073 | 0.812 | 0.090 | WGD | 27.05 | |
AcHB40/AcHB23 | 0.031 | 0.146 | 0.213 | WGD | 4.86 | |
AcHB41/AcHB61 | 0.036 | 0.153 | 0.234 | WGD | 5.10 | |
AcHB41/AcHB15 | 0.331 | 2.083 | 0.159 | WGD | 69.43 | |
AcHB42/AcHB60 | 0.039 | 0.141 | 0.278 | WGD | 4.69 | |
AcHB44/AcHB50 | 0.027 | 0.175 | 0.155 | WGD | 5.83 | |
AcHB44/AcHB23 | 0.065 | 0.809 | 0.080 | WGD | 26.96 | |
AcHB45/AcHB51 | 0.050 | 0.162 | 0.308 | WGD | 5.39 | |
AcHB46/AcHB52 | 0.029 | 0.177 | 0.163 | WGD | 5.89 | |
AcHB48/AcHB58 | 0.022 | 0.113 | 0.193 | WGD | 3.75 | |
AcHB53/AcHB62 | 0.054 | 0.453 | 0.120 | WGD | 15.11 | |
AcHB53/AcHB69 | 0.052 | 0.441 | 0.119 | WGD | 14.70 | |
AcHB54/AcHB60 | 0.453 | 2.059 | 0.220 | WGD | 68.63 | |
AcHB55/AcHB21 | 0.241 | 3.356 | 0.072 | WGD | 111.88 | |
AcHB57/AcHB67 | 0.030 | 0.171 | 0.176 | WGD | 5.70 | |
AcHB59/AcHB20 | 0.236 | 1.196 | 0.198 | WGD | 39.87 | |
AcHB61/AcHB15 | 0.365 | 1.628 | 0.224 | WGD | 54.27 | |
AcHB62/AcHB69 | 0.019 | 0.127 | 0.149 | WGD | 4.24 | |
AcHB63/AcHB11 | 0.046 | 0.217 | 0.212 | WGD | 7.24 | |
AcHB64/AcHB70 | 0.197 | 1.697 | 0.116 | WGD | 56.57 | |
AcHB64/AcHB12 | 0.036 | 0.209 | 0.174 | WGD | 6.96 | |
AcHB64/AcHB16 | 0.252 | 1.597 | 0.158 | WGD | 53.24 | |
AcHB65/AcHB13 | 0.032 | 0.214 | 0.152 | WGD | 7.12 | |
AcHB65/AcHB25 | 0.158 | 0.656 | 0.241 | WGD | 21.85 | |
AcHB66/AcHB14 | 0.064 | 0.195 | 0.327 | WGD | 6.49 | |
AcHB68/AcHB70 | 0.181 | 0.813 | 0.223 | WGD | 27.09 | |
AcHB68/AcHB16 | 0.073 | 0.158 | 0.459 | WGD | 5.28 | |
AcHB70/AcHB16 | 0.106 | 0.851 | 0.125 | WGD | 28.36 | |
A. eriantha | AeHB3/AeHB14 | 0.155 | 0.845 | 0.184 | WGD | 28.17 |
AeHB3/AeHB22 | 0.034 | 0.211 | 0.163 | WGD | 7.04 | |
AeHB3/AeHB51 | 0.141 | 0.700 | 0.202 | WGD | 23.34 | |
AeHB4/AeHB27 | 0.216 | 0.813 | 0.266 | WGD | 27.10 | |
AeHB5/AeHB15 | 0.139 | 0.955 | 0.146 | WGD | 31.85 | |
AeHB5/AeHB52 | 0.184 | 0.931 | 0.197 | WGD | 31.03 | |
AeHB6/AeHB8 | 0.070 | 0.211 | 0.332 | WGD | 7.04 | |
AeHB7/AeHB41 | 0.152 | 0.288 | 0.527 | WGD | 9.61 | |
AeHB8/AeHB17 | 0.368 | 1.484 | 0.248 | WGD | 49.48 | |
AeHB8/AeHB31 | 0.422 | 1.225 | 0.344 | WGD | 40.83 | |
AeHB9/AeHB13 | 0.149 | 0.701 | 0.213 | WGD | 23.37 | |
AeHB14/AeHB22 | 0.148 | 0.769 | 0.193 | WGD | 25.62 | |
AeHB14/AeHB51 | 0.042 | 0.237 | 0.178 | WGD | 7.91 | |
AeHB15/AeHB52 | 0.126 | 0.276 | 0.459 | WGD | 9.19 | |
AeHB16/AeHB35 | 0.326 | 1.388 | 0.235 | WGD | 46.27 | |
AeHB16/AeHB48 | 0.316 | 1.249 | 0.253 | WGD | 41.63 | |
AeHB16/AeHB50 | 0.542 | 2.289 | 0.237 | WGD | 76.30 | |
AeHB17/AeHB31 | 0.420 | 1.877 | 0.224 | WGD | 62.56 | |
AeHB21/AeHB24 | 0.267 | 2.158 | 0.124 | WGD | 71.94 | |
AeHB21/AeHB33 | 0.057 | 0.229 | 0.248 | WGD | 7.64 | |
AeHB22/AeHB51 | 0.148 | 0.577 | 0.257 | WGD | 19.23 | |
AeHB23/AeHB34 | 0.034 | 0.152 | 0.226 | WGD | 5.07 | |
AeHB24/AeHB28 | 0.176 | 0.939 | 0.188 | WGD | 31.29 | |
AeHB24/AeHB33 | 0.217 | 2.306 | 0.094 | WGD | 76.86 | |
AeHB25/AeHB50 | 0.203 | 2.236 | 0.091 | WGD | 74.54 | |
AeHB25/AeHB55 | 0.018 | 0.120 | 0.148 | WGD | 4.00 | |
AeHB29/AeHB33 | 0.251 | 3.008 | 0.084 | WGD | 100.26 | |
AeHB32/AeHB46 | 0.138 | 0.639 | 0.216 | WGD | 21.29 | |
AeHB35/AeHB48 | 0.042 | 0.156 | 0.271 | WGD | 5.20 | |
AeHB37/AeHB42 | 0.055 | 0.246 | 0.224 | WGD | 8.21 | |
AeHB43/AeHB49 | 0.067 | 0.436 | 0.154 | WGD | 14.53 | |
AeHB45/AeHB53 | 0.040 | 0.254 | 0.157 | WGD | 8.46 | |
AeHB50/AeHB54 | 0.279 | 1.315 | 0.212 | WGD | 43.84 | |
AeHB50/AeHB55 | 0.190 | 1.561 | 0.121 | WGD | 52.02 |