Fig. 6

Partial of the co-expression network of module bwtween structure genes and transcription factors. A bisque4 module; B plum2 module. Note: In A, the top three genes which filled with different colors represented structural genes, with 'Pp' abbreviating 'D1_transcript_'. The TF families were shown below. In B, 'Pp' abbreviated 'D1_transcript_', and the genes which filled with different colors in the middle represented structural genes. The arc encompasses genes of the same class, with TF connected on the periphery. In both A and B, the points within each gene family were randomly distributed inside the circle, with the radius of the circle proportional to the number of distribution points. The outermost points were calculated and connected using the chull function of grDevices R Package. The connections between structural genes were mapped in 'red' color with a dashed linetype. The thickness of the lines were mapped based on the weight value