Table 1 Count of motifs that each model found on 200 human ATAC-seq datasets
From: GNNMF: a multi-view graph neural network for ATAC-seq motif finding
Models | FactorNet | scFAN | DeepATAC | MMGraph | MMGraph+jac | GNNMF |
|---|---|---|---|---|---|---|
Motifs.no | 270 | 291 | 281 | 375 | 375 | 385 |
From: GNNMF: a multi-view graph neural network for ATAC-seq motif finding
Models | FactorNet | scFAN | DeepATAC | MMGraph | MMGraph+jac | GNNMF |
|---|---|---|---|---|---|---|
Motifs.no | 270 | 291 | 281 | 375 | 375 | 385 |