Table 1 Quality metrics of transcripts in pituitary
Sample | Clean reads | Clean bases | Q20 (%) | Q30 (%) | GC content (%) | Total mapped | Multiple mapped | Uniquely mapped |
|---|---|---|---|---|---|---|---|---|
LP1 | 21,699,331 | 6,489,415,358 | 98.20 | 94.77 | 49.15 | 20,291,871 (93.51%) | 398,685 (1.84%) | 19,893,187 (91.68%) |
LP2 | 23,189,413 | 6,932,116,122 | 98.33 | 95.10 | 49.24 | 21,704,639 (93.60%) | 461,979 (1.99%) | 21,242,661 (91.60%) |
LP3 | 19,290,472 | 5,767,577,132 | 98.15 | 94.72 | 49.54 | 17,998,306 (93.30%) | 440,208 (2.28%) | 17,558,098 (91.02%) |
BP1 | 24,468,336 | 7,318,629,774 | 98.43 | 95.27 | 47.98 | 23,215,360 (94.88%) | 741,255 (3.03%) | 22,474,105 (91.85%) |
BP2 | 20,122,438 | 6,020,221,454 | 98.46 | 95.42 | 48.47 | 18,942,509 (94.14%) | 671,406 (3.34%) | 18,271,104 (90.80%) |
BP3 | 21,727,047 | 6,500,165,130 | 98.40 | 95.27 | 48.79 | 20,484,626 (94.28%) | 650,102 (2.99%) | 19,834,525 (91.29%) |