Volume 14 Supplement 5

Twelfth International Conference on Bioinformatics (InCoB2013): Computational Biology

Proceedings

Edited by Shoba Ranganathan, Christian Schönbach, Tin Wee Tan and Bairong Shen

Publication of this supplement has not been supported by sponsorship. Information about the source of funding for publication charges can be found in the individual articles. Articles have undergone the journal's standard peer review process for supplements. The Supplement Editors declare that they have no competing interests.

Asia Pacific Bioinformatics Network (APBioNet) Twelfth International Conference on Bioinformatics (InCoB2013). Go to conference site.

Taicang, China

20-22 September 2013

  1. Research

    Genome-wide structural modelling of TCR-pMHC interactions

    The adaptive immune response is antigen-specific and triggered by pathogen recognition through T cells. Although the interactions and mechanisms of TCR-peptide-MHC (TCR-pMHC) have been studied over three decad...

    I-Hsin Liu, Yu-Shu Lo and Jinn-Moon Yang

    BMC Genomics 2013 14(Suppl 5):S5

    Published on: 16 October 2013

  2. Research

    Coffee component hydroxyl hydroquinone (HHQ) as a putative ligand for PPAR gamma and implications in breast cancer

    Coffee contains several compounds that have the potential to influence breast cancer risk and survival. However, epidemiologic data on the relation between coffee compounds and breast cancer survival are spars...

    Babita Shashni, Karun Sharma, Rumani Singh, Kishore R Sakharkar, Sarinder K Dhillon, Yukio Nagasaki and Meena K Sakharkar

    BMC Genomics 2013 14(Suppl 5):S6

    Published on: 16 October 2013

  3. Research

    Detection and classification of peaks in 5' cap RNA sequencing data

    The large-scale sequencing of 5' cap enriched cDNA promises to reveal the diversity of transcription initiation across entire genomes. The process of transcription is noisy, and there is often no single, exact...

    Dario Strbenac, Nicola J Armstrong and Jean YH Yang

    BMC Genomics 2013 14(Suppl 5):S9

    Published on: 16 October 2013

    The Erratum to this article has been published in BMC Genomics 2013 14:767

  4. Research

    Analysis of schizophrenia and hepatocellular carcinoma genetic network with corresponding modularity and pathways: novel insights to the immune system

    Schizophrenic patients show lower incidences of cancer, implicating schizophrenia may be a protective factor against cancer. To study the genetic correlation between the two diseases, a specific PPI network wa...

    Kuo-Chuan Huang, Ko-Chun Yang, Han Lin, Theresa Tsao Tsun-Hui, Wen-Kuei Lee, Sheng-An Lee and Cheng-Yan Kao

    BMC Genomics 2013 14(Suppl 5):S10

    Published on: 16 October 2013

  5. Research

    Co-modulated behavior and effects of differentially expressed miRNA in colorectal cancer

    MicroRNAs (miRNAs) are short noncoding RNAs (approximately 22 nucleotides in length) that play important roles in colorectal cancer (CRC) progression through silencing gene expression. Numerous dysregulated miRNA...

    Wei-Shone Chen, Ting-Wen Chen, Tzu-Hsien Yang, Ling-Yueh Hu, Hung-Wei Pan, Chung-Man Leung, Sung-Chou Li, Meng-Ru Ho, Chih-Wen Shu, Pei-Feng Liu, Shou-Yu Yu, Ya-Ting Tu, Wen-Chang Lin, Tony T Wu and Kuo-Wang Tsai

    BMC Genomics 2013 14(Suppl 5):S12

    Published on: 16 October 2013

  6. Research

    Simple re-instantiation of small databases using cloud computing

    Small bioinformatics databases, unlike institutionally funded large databases, are vulnerable to discontinuation and many reported in publications are no longer accessible. This leads to irreproducible scienti...

    Tin Wee Tan, Chao Xie, Mark De Silva, Kuan Siong Lim, C Pawan K Patro, Shen Jean Lim, Kunde Ramamoorthy Govindarajan, Joo Chuan Tong, Khar Heng Choo, Shoba Ranganathan and Asif M Khan

    BMC Genomics 2013 14(Suppl 5):S13

    Published on: 16 October 2013

  7. Research

    Analysis of the intestinal microbiota using SOLiD 16S rRNA gene sequencing and SOLiD shotgun sequencing

    Metagenomics seeks to understand microbial communities and assemblages by DNA sequencing. Technological advances in next generation sequencing technologies are fuelling a rapid growth in the number and scope o...

    Suparna Mitra, Karin Förster-Fromme, Antje Damms-Machado, Tim Scheurenbrand, Saskia Biskup, Daniel H Huson and Stephan C Bischoff

    BMC Genomics 2013 14(Suppl 5):S16

    Published on: 16 October 2013

Portable peer review

The editors of BMC Genomics support initiatives that expedite the peer review process and are happy to consider manuscripts that have been reviewed in Axios Review or Peerage of Science. Please indicate in your cover letter if this applies to your manuscript.

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