Volume 15 Supplement 12

Selected articles from the IX International Conference on the Bioinformatics of Genome Regulation and Structure\Systems Biology (BGRS\SB-2014): Genomics

Research

Edited by Ancha V Baranova and Yuriy L Orlov

Publication of this supplement has not been supported by sponsorship. Information about the source of funding for publication charges can be found in the individual articles. Articles have undergone the journal's standard peer review process for supplements. The Supplement Editors declare that they have no competing interests.

IX International Conference on the Bioinformatics of Genome Regulation and Structure\Systems Biology (BGRS\SB-2014). Go to conference site.

Novosibirsk, Russia

23-28 June 2014

Related articles have been published in supplements to BMC Evolutionary Biology, BMC Genetics and BMC Systems Biology.

  1. Research

    Mathematical model of the Tat-Rev regulation of HIV-1 replication in an activated cell predicts the existence of oscillatory dynamics in the synthesis of viral components

    The life cycle of human immunodeficiency virus type-1 (HIV-1) makes possible the realization of regulatory strategies that can lead to complex dynamical behavior of the system. We analyze the strategy which is...

    Vitaly A Likhoshvai, Tamara M Khlebodarova, Sergei I Bazhan, Irina A Gainova, Valery A Chereshnev and Gennady A Bocharov

    BMC Genomics 2014 15(Suppl 12):S1

    Published on: 19 December 2014

  2. Research

    Time-course human urine proteomics in space-flight simulation experiments

    Long-term space travel simulation experiments enabled to discover different aspects of human metabolism such as the complexity of NaCl salt balance. Detailed proteomics data were collected during the Mars105 i...

    Hans Binder, Henry Wirth, Arsen Arakelyan, Kathrin Lembcke, Evgeny S Tiys, Vladimir A Ivanisenko, Nikolay A Kolchanov, Alexey Kononikhin, Igor Popov, Evgeny N Nikolaev, Lyudmila Kh Pastushkova and Irina M Larina

    BMC Genomics 2014 15(Suppl 12):S2

    Published on: 19 December 2014

  3. Research

    Application of quantitative trait locus mapping and transcriptomics to studies of the senescence-accelerated phenotype in rats

    Etiology of complex disorders, such as cataract and neurodegenerative diseases including age-related macular degeneration (AMD), remains poorly understood due to the paucity of animal models, fully replicating...

    Elena E Korbolina, Nikita I Ershov, Leonid O Bryzgalov and Natalia G Kolosova

    BMC Genomics 2014 15(Suppl 12):S3

    Published on: 19 December 2014

  4. Research

    Exhaustive data mining comparison of the effects of low doses of ionizing radiation, formaldehyde and dioxins

    Ionizing radiation in low doses is the ubiquitous environmental factor with harmful stochastic effects. Formaldehyde is one of the most reactive household and industrial pollutants. Dioxins are persistent orga...

    Alexey Moskalev, Mikhail Shaposhnikov, Ekaterina Plyusnina, Sergey Plyusnin, Olga Shostal, Alexander Aliper and Alex Zhavoronkov

    BMC Genomics 2014 15(Suppl 12):S5

    Published on: 19 December 2014

  5. Research

    Sequence-based model of gap gene regulatory network

    The detailed analysis of transcriptional regulation is crucially important for understanding biological processes. The gap gene network in Drosophila attracts large interest among researches studying mechanisms o...

    Konstantin Kozlov, Vitaly Gursky, Ivan Kulakovskiy and Maria Samsonova

    BMC Genomics 2014 15(Suppl 12):S6

    Published on: 19 December 2014

  6. Research

    Analysis of signaling networks distributed over intracellular compartments based on protein-protein interactions

    Biological processes are usually distributed over various intracellular compartments. Proteins from diverse cellular compartments are often involved in similar signaling networks. However, the difference in th...

    Olga Vasil'evna Popik, Olga Vladimirovna Saik, Evgeny Dmitrievich Petrovskiy, Björn Sommer, Ralf Hofestädt, Inna Nikolaevna Lavrik and Vladimir Aleksandrovich Ivanisenko

    BMC Genomics 2014 15(Suppl 12):S7

    Published on: 19 December 2014

  7. Research

    Chromatin Interaction Analysis with Paired-End Tag (ChIA-PET) sequencing technology and application

    Long-range chromatin interactions play an important role in transcription regulation. Chromatin Interaction Analysis with Paired-End-Tag sequencing (ChIA-PET) is an emerging technology that has unique advantag...

    Guoliang Li, Liuyang Cai, Huidan Chang, Ping Hong, Qiangwei Zhou, Ekaterina V Kulakova, Nikolay A Kolchanov and Yijun Ruan

    BMC Genomics 2014 15(Suppl 12):S11

    Published on: 19 December 2014

  8. Research

    Molecular analysis of the benthos microbial community in Zavarzin thermal spring (Uzon Caldera, Kamchatka, Russia)

    Geothermal areas are of great interest for the study of microbial communities. The results of such investigations can be used in a variety of fields (ecology, microbiology, medicine) to answer fundamental ques...

    Alexey S Rozanov, Alla V Bryanskaya, Tatiana K Malup, Irina A Meshcheryakova, Elena V Lazareva, Oksana P Taran, Timofey V Ivanisenko, Vladimir A Ivanisenko, Sergey M Zhmodik, Nikolay A Kolchanov and Sergey E Peltek

    BMC Genomics 2014 15(Suppl 12):S12

    Published on: 19 December 2014

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The editors of BMC Genomics support initiatives that expedite the peer review process and are happy to consider manuscripts that have been reviewed in Peerage of Science. Please indicate in your cover letter if this applies to your manuscript.

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