Volume 9 Supplement 1

The 2007 International Conference on Bioinformatics & Computational Biology (BIOCOMP'07)

Research

Edited by Jack Y Jang, Mary Qu Yang, Mengxia (Michelle) Zhu, Youping Deng and Hamid R Arabnia

The 2007 International Conference on Bioinformatics & Computational Biology (BIOCOMP'07). Go to conference site.

Las Vegas, NV, USA

25-28 June 2007

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  1. Research

    Promoting synergistic research and education in genomics and bioinformatics

    Bioinformatics and Genomics are closely related disciplines that hold great promises for the advancement of research and development in complex biomedical systems, as well as public health, drug design, compar...

    Jack Y Yang, Mary Qu Yang, Mengxia Michelle Zhu, Hamid R Arabnia and Youping Deng

    BMC Genomics 2008 9(Suppl 1):I1

    Published on: 20 March 2008

  2. Research

    Bayesian biclustering of gene expression data

    Biclustering of gene expression data searches for local patterns of gene expression. A bicluster (or a two-way cluster) is defined as a set of genes whose expression profiles are mutually similar within a subs...

    Jiajun Gu and Jun S Liu

    BMC Genomics 2008 9(Suppl 1):S4

    Published on: 20 March 2008

  3. Research

    Investigation of transmembrane proteins using a computational approach

    An important subfamily of membrane proteins are the transmembrane α-helical proteins, in which the membrane-spanning regions are made up of α-helices. Given the obvious biological and medical significance of t...

    Jack Y Yang, Mary Qu Yang, A Keith Dunker, Youping Deng and Xudong Huang

    BMC Genomics 2008 9(Suppl 1):S7

    Published on: 20 March 2008

  4. Research

    HMMEditor: a visual editing tool for profile hidden Markov model

    Profile Hidden Markov Model (HMM) is a powerful statistical model to represent a family of DNA, RNA, and protein sequences. Profile HMM has been widely used in bioinformatics research such as sequence alignmen...

    Jianyong Dai and Jianlin Cheng

    BMC Genomics 2008 9(Suppl 1):S8

    Published on: 20 March 2008

  5. Research

    Semantically linking and browsing PubMed abstracts with gene ontology

    The technological advances in the past decade have lead to massive progress in the field of biotechnology. The documentation of the progress made exists in the form of research articles. The PubMed is the curr...

    Bhanu C Vanteru, Jahangheer S Shaik and Mohammed Yeasin

    BMC Genomics 2008 9(Suppl 1):S10

    Published on: 20 March 2008

  6. Research

    An integrative approach to characterize disease-specific pathways and their coordination: a case study in cancer

    The most common application of microarray technology in disease research is to identify genes differentially expressed in disease versus normal tissues. However, it is known that, in complex diseases, phenotyp...

    Min Xu, Ming-Chih J Kao, Juan Nunez-Iglesias, Joseph R Nevins, Mike West and Xianghong Jasmine Zhou

    BMC Genomics 2008 9(Suppl 1):S12

    Published on: 20 March 2008

  7. Research

    Transcriptome profiling of Saccharomyces cerevisiae mutants lacking C2H2 zinc finger proteins

    The budding yeast Saccharomyces cerevisiae is a eukaryotic organism with extensive genetic redundancy. Large-scale gene deletion analysis has shown that over 80% of the ~6200 predicted genes are nonessential and ...

    Jinghe Mao, Tanwir Habib, Ming Shenwu, Baobin Kang, Wilbur Allen, LaShonda Robertson, Jack Y Yang and Youping Deng

    BMC Genomics 2008 9(Suppl 1):S14

    Published on: 20 March 2008

  8. Research

    Supervised learning method for the prediction of subcellular localization of proteins using amino acid and amino acid pair composition

    Occurrence of protein in the cell is an important step in understanding its function. It is highly desirable to predict a protein's subcellular locations automatically from its sequence. Most studied methods f...

    Tanwir Habib, Chaoyang Zhang, Jack Y Yang, Mary Qu Yang and Youping Deng

    BMC Genomics 2008 9(Suppl 1):S16

    Published on: 20 March 2008

  9. Research

    Using RNase sequence specificity to refine the identification of RNA-protein binding regions

    Massively parallel pyrosequencing is a high-throughput technology that can sequence hundreds of thousands of DNA/RNA fragments in a single experiment. Combining it with immunoprecipitation-based biochemical as...

    Xin Wang, Guohua Wang, Changyu Shen, Lang Li, Xinguo Wang, Sean D Mooney, Howard J Edenberg, Jeremy R Sanford and Yunlong Liu

    BMC Genomics 2008 9(Suppl 1):S17

    Published on: 20 March 2008

  10. Research

    Identification of transcription factor and microRNA binding sites in responsible to fetal alcohol syndrome

    This is a first report, using our MotifModeler informatics program, to simultaneously identify transcription factor (TF) and microRNA (miRNA) binding sites from gene expression microarray data. Based on the assum...

    Guohua Wang, Xin Wang, Yadong Wang, Jack Y Yang, Lang Li, Kenneth P Nephew, Howard J Edenberg, Feng C Zhou and Yunlong Liu

    BMC Genomics 2008 9(Suppl 1):S19

    Published on: 20 March 2008

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Portable peer review

 The editors of BMC Genomics support initiatives that expedite the peer review process and are happy to consider manuscripts that have been reviewed in Axios Review or Peerage of Science. Please indicate in your cover letter if this applies to your manuscript.

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