Gene clustering based on expression profiles for 12 h, 3d and 8d time points having contrasting expression over the course of infection. X-axis (green), Resistant profiles. Resistant: Profile A, III; Profile B, IIS; Profile C, ISS; Profile D, ISI; Profile E, SII; Profile F, SSI; Profile G, SIS; Profile H, SSS. Y-axis (red), Susceptible profiles. Susceptible Profile 1, III; Profile 2, IIS; Profile 3, ISS; Profile 4, ISI; Profile 5, SII; Profile 6, SSI; Profile 7, SIS; Profile 8, SSS. The gene counts for the contrasting gene expression analyses are provided. The gene counts for the overlapping profile pair were provided (Fig. 7). All gene lists are provided as supplemental data (Supplemental Table Thirty-seven).