Table 2 Differentially expressed genes in pi-L2.
R-pi-L2-INDUCED | ||||||||
|---|---|---|---|---|---|---|---|---|
Afx ID | Array ID | Best Hit ID | E-value | Best Hit Organism | Best Hit Description | FC | P-Value | q-Value(%) |
HgAffx.22005.3.S1_at | AF500033.1 | AAP30772 | 1.00E-56 | Heterodera glycines | putative gland protein G23G12 | 117 | 0.00000611 | 0 |
HgAffx.22005.3.S1_x_at | AF500033.1 | AAP30772 | 1.00E-56 | Heterodera glycines | putative gland protein G23G12 | 69.3 | 0.000000293 | 0 |
HgAffx.12397.1.S1_at | CB375585 | AAL78214 | 8.00E-12 | Heterodera glycines | putative esophageal gland cell protein Hgg-20 | 9.21 | 0.00125 | 0 |
HgAffx.10464.1.S1_at | CB378037 | NP_001023126 | 4.00E-12 | Caenorhabditis elegans | Temporarily Assigned Gene name (tag-287) | 7.52 | 0.00188 | 0 |
HgAffx.6167.1.S1_at | CB826044 | AAL78214 | 3.00E-14 | Heterodera glycines | putative esophageal gland cell protein Hgg-20 | 5.04 | 0.000766 | 0 |
HgAffx.13471.7.S1_at | BF013637 | AAO49799 | 7.00E-36 | Heterodera glycines | arginine kinase | 4.71 | 0.000329 | 0 |
HgAffx.15037.1.S1_at | CB375286 | XP_001900724 | 4.00E-15 | Brugia malayi | BESS motif family protein | 4.26 | 0.00792 | 1.562478529 |
HgAffx.23436.1.S1_at | BF014413 | AAP30770 | 2.00E-11 | Heterodera glycines | putative gland protein G17G01 | 3.86 | 0.00254 | 0 |
HgAffx.3818.1.A1_at | CK348872 | XP_001902079 | 2.00E-16 | Brugia malayi | Fucosyl transferase family protein | 3.63 | 0.00575 | 1.562478529 |
HgAffx.22919.1.S1_at | CB375623 | XP_001670157 | 2.00E-15 | Caenorhabditis briggsae AF16 | Hypothetical protein CBG06224 | 3.48 | 0.0104 | 1.562478529 |
HgAffx.4275.2.S1_at | AF500024.1 | AAP30763 | 4.00E-170 | Heterodera glycines | putative gland protein G8H07 | 3.05 | 0.00348 | 0 |
HgAffx.9246.1.S1_at | CB379256 | XP_001899138 | 1.00E-72 | Brugia malayi | 3'-5' exonuclease family protein | 3.03 | 0.0199 | 9.06375819 |
HgAffx.11497.1.S1_at | CB934953 | XP_001900969 | 3.00E-24 | Brugia malayi | DNA methyltransferase 1 associated protein 1 | 2.73 | 0.0189 | 9.06375819 |
HgAffx.15350.1.S1_at | CB281644 | XP_001196614 | 6.00E-53 | Strongylocentrotus purpuratus | Serine/threonine-protein kinase Eg2-like | 2.51 | 0.0028 | 1.562478529 |
HgAffx.23782.1.S1_at | BF014067 | XP_001899293 | 5.00E-13 | Brugia malayi | hypothetical protein Bm1_39195 | 2.5 | 0.00606 | 9.06375819 |
HgAffx.2353.1.S1_at | CK350675 | YP_001958273 | 2.00E-13 | Candidatus Amoebophilus asiaticus 5a2 | hypothetical protein Aasi_1217 | 2.16 | 0.0014 | 1.562478529 |
HgAffx.1966.1.S1_at | CK351813 | AAO85518 | 1.00E-59 | Oesophagostomum dentatum | putative serine/threonine phosphatase | 1.88 | 0.000209 | 0 |
HgAffx.12364.1.S1_at | AF344864.1 | AAL78213 | 5.00E-139 | Heterodera glycines | probable protein kinase Hgg-20 | 1.77 | 0.00444 | 9.06375819 |
HgAffx.6833.1.S1_at | CB825378 | XP_001901483 | 2.00E-36 | Brugia malayi | hypothetical protein Bm1_50075 | 1.69 | 0.00296 | 9.06375819 |
R-pi-L2-SUPPRESSED | ||||||||
Afx ID | Array ID | Best Hit ID | E-value | Best Hit Organism | Best Hit Description | FC | P-Value | q-value(%) |
HgAffx.22522.2.A1_s_at | CK351795 | AAL78214 | 6.00E-30 | Heterodera glycines | putative esophageal gland cell protein Hgg-20 | -14.5 | 0.000008 | 0 |
HgAffx.22522.2.A1_x_at | CK351795 | AAL78214 | 6.00E-30 | Heterodera glycines | putative esophageal gland cell protein Hgg-20 | -13.9 | 0.0000174 | 0 |
HgAffx.22522.2.A1_at | CK351795 | AAL78214 | 6.00E-30 | Heterodera glycines | putative esophageal gland cell protein Hgg-20 | -13.1 | 0.0000382 | 0 |
HgAffx.8428.1.S1_at | CB825226 | XP_001896306 | 7.00E-28 | Brugia malayi | PX domain containing protein | -8.28 | 0.000124 | 0 |
HgAffx.2485.1.S1_at | CK350205 | XP_001677586 | 4.00E-23 | Caenorhabditis briggsae AF16 | Hypothetical protein CBG05236 | -7.66 | 0.000329 | 0 |
HgAffx.22522.2.S1_at | CK351795 | AAL78214 | 6.00E-30 | Heterodera glycines | putative esophageal gland cell protein Hgg-20 | -6.48 | 0.00364 | 0 |
HgAffx.22522.2.S1_x_at | CK351795 | AAL78214 | 6.00E-30 | Heterodera glycines | putative esophageal gland cell protein Hgg-20 | -5.64 | 0.00533 | 0 |
HgAffx.20464.1.S1_at | BI749289 | NP_505424 | 7.00E-27 | Caenorhabditis elegans | E02C12.4 | -4.68 | 0.000339 | 0 |
HgAffx.13898.1.S1_at | CB378644 | NP_495784 | 1.00E-32 | Caenorhabditis elegans | ZYGote defective (zyg-9) | -3.67 | 0.00052 | 0 |
HgAffx.10090.1.S1_at | CB378411 | CAB88203 | 2.00E-28 | Globodera pallida | putative cuticular collagen | -3.65 | 0.0128 | 5.390550924 |
HgAffx.12914.1.S1_at | CB281819 | XP_001665811 | 1.00E-54 | Caenorhabditis briggsae AF16 | hypothetical protein CBG18196 | -3.65 | 0.000339 | 0 |
HgAffx.15942.1.S1_at | CB280414 | XP_001676377 | 5.00E-11 | Caenorhabditis briggsae AF16 | Hypothetical protein CBG14167 | -2.74 | 0.0049 | 1.268364923 |
HgAffx.21565.2.S1_at | BI748188 | XP_001678481 | 2.00E-14 | Caenorhabditis briggsae AF16 | Hypothetical protein CBG13418 | -2.52 | 0.00454 | 1.268364923 |
HgAffx.15681.1.S1_at | CB281313 | XP_001678446 | 1.00E-21 | Caenorhabditis briggsae AF16 | Hypothetical protein CBG13461 | -2.19 | 0.00417 | 4.791600821 |
HgAffx.23342.1.S1_at | BF014507 | CAC83611 | 7.00E-61 | Globodera rostochiensis | EXPB1 protein | -2.16 | 0.00882 | 9.06375819 |