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Table 3 Differentially expressed genes in i-L2 NL1-RHg at 12 h.

From: Population-specific gene expression in the plant pathogenic nematode Heterodera glycines exists prior to infection and during the onset of a resistant or susceptible reaction in the roots of the Glycine max genotype Peking

R-12 hour-INDUCED
Afx ID Array ID Best Hit ID E-value Best Hit Organism Best Hit Description FC P-Value q-value(%)
AFFX-r2-Hg-actin-3_x_at AF318603.2 AAG47837 0 Heterodera glycines actin 1 4.78 0.00513 0
HgAffx.15051.1.S1_at CB279435 ABN64198 2.00E-22 Meloidogyne incognita glutathione S-transferase-1 3.38 0.00692 0
AFFX-r2-Hg-actin-3_at AF318603.2 AAG47837 0 Heterodera glycines actin 1 3 0.00117 0
HgAffx.18740.1.S1_at AF318603.2 AAG47837 0 Heterodera glycines actin 1 2.8 0.00318 0
HgAffx.18740.1.S1_x_at AF318603.2 AAG47837 0 Heterodera glycines actin 1 2.59 0.00582 0
HgAffx.22081.1.S1_at CK349167 NP_496721 4.00E-30 Caenorhabditis elegans Carnitine Palmitoyl Transferase family member (cpt-1) 2.46 0.0018 0
R-12 hour-SUPPRESSED         
Afx ID Array ID Best Hit ID E-value Best Hit Organism Best Hit Description FC P-Value q-value(%)
  1. Probe set lists that are induced i-L2 NL1-RHg at 12 h that ultimately undergo a resistant reaction. FC-NL1-RHg; fold change- NL1-RHg; PV- NL1-RHg, p-value-NL1-RHg. A > |1.5| fold cutoff and P ≤ 0.05 was used. FDR (set at 10%) parameters are: Score (d), q-value (%).