Skip to main content

Table 4 Differentially expressed genes in i-L2 NL1-RHg at 3d.

From: Population-specific gene expression in the plant pathogenic nematode Heterodera glycines exists prior to infection and during the onset of a resistant or susceptible reaction in the roots of the Glycine max genotype Peking

R-3 DAY-INDUCED

Afx ID

Array ID

Best Hit ID

E-value

Best Hit Organism

Best Hit Description

FC

P-Value

q-value(%)

HgAffx.20336.1.S1_at

AF044210.1

AAC33848

2.00E-172

Heterodera glycines

beta-1,4-endoglucanase-3 precursor

3.41

0.0412

9.206618641

AFFX-r2-Hg-actin-3_at

AF318603.2

AAG47837

0

Heterodera glycines

actin 1

2.18

0.0103

9.206618641

R-3 DAY-SUPPRESSED

        

Afx ID

Array ID

Best Hit ID

E-value

Best Hit Organism

Best Hit Description

FC

P-value

q-value(%)

HgAffx.17178.1.S1_at

CD748082

XP_001641607

2.00E-12

Nematostella vectensis

predicted protein

-8.5

0.000186

8.613475143

HgAffx.16643.1.S1_at

CK349745

XP_001895036

6.00E-20

Brugia malayi

T-complex protein 1, delta subunit

-4.24

0.013

9.206618641

HgAffx.22600.1.S1_at

AF469055.1

AAN32884

0

Heterodera glycines

cellulase ENG-5

-1.95

0.0109

4.774861221

HgAffx.20813.1.S1_at

AF502393.1

AAP30836

3.00E-83

Heterodera glycines

putative gland protein G30C02; Hg-G30C02

-1.58

0.027

0

HgAffx.2725.1.S1_at

AF490251.1

AAO85459

1.00E-103

Heterodera glycines

putative gland protein G20E03

-1.53

0.0121

4.774861221

HgAffx.9968.2.S1_at

CB374502

XP_001664903

8.00E-54

Caenorhabditis briggsae AF16

hypothetical protein CBG24609

-1.52

0.0392

9.206618641

  1. Probe set lists that are induced in NL1-RHg at 3d that ultimately undergo a resistant reaction. FC-NL1-RHg, fold change-NL1-RHg; PV-NL1-RHg, p-value-NL1-RHg. A> |1.5| fold cutoff and P ≤ 0.05 was used. FDR (set at 10%) parameters are: Score (d), q-value (%).