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Table 6 RT-PCR validation

From: Population-specific gene expression in the plant pathogenic nematode Heterodera glycines exists prior to infection and during the onset of a resistant or susceptible reaction in the roots of the Glycine max genotype Peking

Afx probe set

Genbank ID

Gene

MA-L2

qRT-PCR-L2

HgAffx.13291.1.S1_at

CB374691

Hg-unc-97

1.6239316

1.284

HgAffx.18723.1.S1_at

CA940457

Hg-unc-15

1.2863248

1.274

HgAffx.21154.1.S1_at

CK394306

Hg-unc-27

1.2735043

1.253

HgAffx.21881.2.S1_at

CK351699

Hg-unc-112

1.2521368

1.139

HgAffx.15612.1.S1_at

CB281382

Hg-unc-9

1.1410256

1.435

HgAffx.11541.1.S1_at

CB934909

Hg-dys-1

1.4358974

1.442

HgAffx.17035.1.S1_at

CB279321

Hg-unc-60B

1.4444444

1.419

  1. Column headings: Afx probe set, GeneChip® array identifier; Genbank ID, Genbank accession number; L2-qRT-PCR, L2 fold expression from qRT-PCR; L2-MA, L2 fold expression on microarray.