Molecular determinants archetypical to the phylum Nematoda

BMC Genomics

Table 1 Species and sequences.

Clades/Species		Code	# EST Contigs	# Poly-peptides
EST contigs
V	Ancylostoma caninum ^a	AC	5,484	5,444
	Ancylostoma ceylanicum ^a	AE	4,953	4,954
	Haemonchus contortus ^a	HC	9,842	9,819
	Nippostrongylus brasiliensis ^a	NB	3,949	3,852
	Ostertagia ostertagi ^a	OS	4,831	4,821
	Pristionchus pacificus ^f	PP	2,654	2,654
IVa	Parastrongyloides trichosuri ^a	PT	4,934	4,925
	Strongyloides ratti ^a	SR	5,237	5,235
	Strongyloides stercoralis ^a	SS	3,479	3,478
IVb	Globodera pallida ^p	GP	2,973	2,960
	Globodera rostochiensis ^p	GR	2,530	2,528
	Heterodera glycines ^p	HG	2,026	2,016
	Heterodera schachtii ^p	HS	1,600	1,593
	Meloidogyne arenaria ^p	MA	3,372	3,354
	Meloidogyne chitwoodi ^p	MC	5,880	5,860
	Meloidogyne hapla ^p	MH	11,193	11,178
	Meloidogyne incognita ^p	MI	9,107	9,098
	Meloidogyne javanica ^p	MJ	5,172	5,162
	Meloidogyne paranaensis ^p	MP	2,263	2,252
	Pratylenchus penetrant ^p	PE	488	488
	Radopholus similis ^p	RS	788	789
	Zeldia punctata ^f	ZP	202	202
III	Ascaris suum ^a	AS	17,989	17,843
	Brugia malayi ^a	BM	1,609	1,517
	Dirofilaria immitis ^a	DI	2,534	2,527
	Toxocara canis ^a	TX	2,135	2,113
I	Trichinella spiralis ^a	TS	5,958	5,952
	Trichuris vulpis ^a	TV	1,690	1,681
	Xiphinema index ^p	XI	5,485	5,451
Genes
V	Ancylostoma caninum ^a	AC		3,998
	Caenorhabditis elegans ^f	CE		23,162
	Caenorhabditis briggsae ^f	CB		19,723
	Caenorhabditis remanei ^f	CR		25,775
III	Brugia malayi ^a	BM		11,750

ISSN: 1471-2164