From: Detection of genomic deletions in rice using oligonucleotide microarrays
Chr | Number of deleted gene models predicted per IR64 mutant line at log ratio < -0.6 for 50% or more probes in a probe set | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
 | d1 | D256 | D2943 | G282a | G650 | G6458 | G6489 | G6603 | G6686 | G6728 | G7534 | G9799 | F1856 | F2045 | Total |
1 | 11 | 0 | 0 | 64 | 11 | 0 | 0 | 5 | 2 | 0 | 1 | 0 | 0 | 0 | 30 |
2 | 16 | 0 | 0 | 38 | 16 | 1 | 1 | 4 | 0 | 1 | 2 | 0 | 7 | 1 | 49 |
3 | 7 | 0 | 0 | 37 | 3 | 4 | 4 | 9 | 8 | 4 | 4 | 0 | 0 | 4 | 47 |
4 | 18 | 0 | 0 | 24 | 14 | 3 | 3 | 5 | 1 | 3 | 6 | 0 | 2 | 4 | 59 |
5 | 41 | 0 | 0 | 34 | 12 | 3 | 2 | 6 | 0 | 2 | 5 | 0 | 0 | 2 | 73 |
6 | 9 | 0 | 0 | 20 | 8 | 2 | 2 | 5 | 0 | 2 | 4 | 0 | 0 | 2 | 34 |
7 | 4 | 0 | 1 | 62 | 2 | 1 | 1 | 7 | 1 | 1 | 1 | 0 | 0 | 1 | 20 |
8 | 5 | 0 | 1 | 20 | 8 | 0 | 4 | 4 | 0 | 1 | 2 | 0 | 1 | 0 | 26 |
9 | 9 | 1 | 0 | 21 | 6 | 2 | 2 | 4 | 0 | 2 | 2 | 0 | 0 | 2 | 30 |
10 | 25 | 0 | 0 | 16 | 22 | 4 | 11 | 4 | 1 | 4 | 8 | 1 | 2 | 4 | 86 |
11 | 3 | 0 | 0 | 27 | 0 | 3 | 4 | 8 | 1 | 3 | 5 | 0 | 0 | 3 | 30 |
12 | 20 | 1 | 0 | 26 | 21 | 1 | 1 | 2 | 1 | 1 | 1 | 28 | 28 | 27 | 132 |
Total | 168 | 2 | 2 | 359 | 123 | 24 | 35 | 63 | 15 | 24 | 41 | 29 | 40 | 50 | 616 |