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Table 2 Gene Ontology enrichment by biological process and cellular localization of genes identified by functional profiling

From: Novel insights into iron metabolism by integrating deletome and transcriptome analysis in an iron deficiency model of the yeast Saccharomyces cerevisiae

BIOLOGICAL PROCESS CELLULAR COMPONENT
Category p-value1 # genes2 Category p-value1 # genes2
Transport 1.87 E-14 53 Endosome 5.24 E-10 11
Organelle organization and biogenesis 2.44 E-12 41 Peroxisome 5.11 E-07 9
Peroxisome organization and biogenesis 6.98 E-12 11 Cytoplasm 3.94 E-06 73
Intracellular protein transport 3.11 E-11 32 Peroxisomal membrane 6.98 E-06 5
Protein transport 6.79 E-10 33 Intracellular 1.16 E-04 98
Protein-peroxisome targeting 4.41 E-09 7 Cell 1.75 E-04 102
Protein targeting 4.99 E-09 22 AP-3 adaptor complex 3.76 E-03 2
Cytoplasm organization and biogenesis 1.82 E-08 41 Vacuolar membrane 6.58 E-03 5
Vacuole organization and biogenesis 6.98 E-07 14 Hydrogen-translocating V-type ATPase complex 7.16 E-03 3
Protein-vacuolar targeting 1.90 E-06 10 Membrane 7.28 E-03 28
  1. 1Calculated from hypergeometric distribution P < 0.01
  2. 2Number of identified genes in the Gene Ontology (GO) category
  3. Enriched categories were identified using Funspec; see Additional file 4 for complete tables.