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Table 1 List of primers for amplification and full double-stranded sequence coverage of the entire mtDNA codR

From: Sequencing strategy for the whole mitochondrial genome resulting in high quality sequences

 

Name

Sequence 5'

Corresponding fragment

PCR

FampA

AAATCTTACCCCGCCTGTTT

A

PCR

RampA

AATTAGGCTGTGGGTGGTTG

A

PCR

FampB

GCCATACTAGTCTTTGCCGC

B

PCR

RampB

GGCAGGTCAATTTCACTGGT

B

1

F1

CCGCTTCTGGCCACAGCACT

B

2

F2

GGTTGGTCAATTTCGTGCCAG

B

3

R1

ACTTGGGTTAATCGTGTGACC

B

4

F3

CATCAAGCACGCAGCAATG

B

5

F4

CTCACCACCTCTTGCTCAGC

B

6

F5

CTTGACCGCTCTGAGCTAAAC

B

7

F6

AAGCTAAGACCCCCGAAACC

B

8

F7

AAACCTACCGAGCCTGGTG

B

9

F8

GAGGAACAGCTCTTTGGACAC

B

10

F9

TCGTCCCAACAATTATATTACTACCA

B

11

R2

CTGTTTGTCGTAGGCAGATGG

B

12

F10

AACGCCACTTATCCAGTGAACC

B

13

F11

GACTCCCTAAAGCCCATGTCG

B

14

F12

CATCTGCCTACGACAAACA

B

15

F13

ACAGCCATTCTCATCCAAACCC

B

16

F14

AACCACGTTCTCCTGATCAAA

B

17

R3

GATATCGCCGATACGGTTG

B

18

R4

AGCGGATGAGTAAGAAGATTCC

B

19

R5

TTGAAGAAGGCGTGGGTACAG

B

20

F15

TTCATCCCTGTAGCATTGTTCG

B

21

F16

TTGCTCATCAGTTGATGATACG

B

22

F17

CACTCTGTTCGCAGCAGTATG

B

23

F18

CATCATCGAAACCGCAAAC

B

24

F19

TTTCTCCAACATACTCGGATTC

B

25

F20

ACAAACAATGGTCAACCAGTAAC

B

26

F21

TCCAAAGACAACCATCATTCC

B

27

R6

TTATCGGAATGGGAGGTGATTC

B

28

F22

TACTCACCAGACGCCTCAACCG

B

29

F23

AGTCCCACCCTCACACGATTC

B

30

F24

CGCCTACACAATTCTCCGATC

B

31

R7

CGGTTGTTGATGGGTGAGTC

B

32

F25

AAATGGGCCTGTCCTTGTAG

B

33

R8

TCATAAGGGCTATCGTAGTTTTC

B

34

F26

GTGGCAAGAAATGGGCTAC

B

35

F27

AACATATAACTGAACTCCTCACACC

B

36

F28

GCCGCAGTACTCTTAAAACTAGG

B

37

F29

AGGACTCAACATACTAGTCACAGC

B

38

F30

GCCATACTAGTCTTTGCCGC

B

39

R9

GCTGTGTTGGCATCTGCTC

B

40

F31

AAAGACCACATCATCGAAACC

B

41

F32

CTAACAGGTCAACCTCGCTTCC

B

42

F33

CCTTCATAAATTATTCAGCTTCCT

B

43

F34

CAATGATATGAAAAACCATCGTT

B

44

R10

GGATGGCGGATAGTAAGTTTGT

B

45

F35

CAGGGTTGGTCAATTTCGT

B

46

F36

AATGGTTTGGCTAAGGTTGT

B

47

R11

ACGAACAATGCTACAGGGATG

B

48

F37

GGCATTATCCTCCTGCTTGCAACTAT

B

49

R12

ATGTCCTGATCCAACATCGAG

A

50

R13

AGAAGAGCGATGGTGAGAGC

A

51

F38

CGACCTCGATGTTGGATCAGGACA

A

52

F39

AGATGGCAGAGCCCGGTAATC

A

53

F40

ACTACAACCCTTCGCTGACG

A

54

F41

CCCTAGCATTACTTATATGATATGTCTCCATACCCATTACAATCTCC

A

55

F42

TCAGGCTTCAACATCGAATACG

A

56

F43

CCCATCCTAAAGTAAGGTCAGC

A

57

F44

CCCTTTCACTTCTGAGTCCCAG

A

58

F45

CACCATCACCCTCCTTAACC

A

59

R14

GCTGAGTGAAGCATTGGACTG

A

60

F46

TAAGCACCCTAATCAACTGGC

A

61

R15

ATAGTGATGCCAGCAGCTAGG

A

62

F47

CGCATCTGCTATAGTGGAGG

A

63

R16

TTTCATGTGGTGTATGCATCG

A

64

F48

GCCATAACCCAATACCAAACG

A

65

F49

GAGGCTTCATTCACTGATTTCC

A

66

R17

GGGCAGGATAGTTCAGACGG

A

67

F50

TTCCCACAACACTTTCTCGGCC

A

68

R18

AAGTTAGCTTTACAGTGGGCTCTAG

A

69

F51

CGGTCAATGCTCTGAAATCTGTG

A

70

F52

CTGTTCGCTTCATTCATTGCC

A

71

R19

GTGGCGCTTCCAATTAGGTG

A

72

R20

GTGCTTTCTCGTGTTACATCG

A

73

R21

GAAAGTTGAGCCAATAATGACG

A

74

F53

TTTCACTTCCACTCCATAACGC

A

75

F54

CCTGATACTGGCATTTTGTAGATGTGG

A

76

F55

ACTACCACAACTCAACGGCTAC

A

77

F56

CTAACCGTGCAAAGGTAGCA

A

78

F57

GCAATTCCCGGACGTCTAAACCAAA

A

79

F58

GCCATAATATGATTTATCTCCACA

A

80

F59

AAACCCTCGTTCCACAGAA

A

81

F60

GATGAATAATAGCAGTTCTACCGT

A

82

F61

CAACGTAAAAATAAAATGACAGTT

A

83

F62

ATATGAAAATCACCTCGGAGC

A

84

R22

AGTTACAATATGGGAGATTATTCC

A

85

F63

CGCAAGTAGGTCTACAAGACG

A

86

F64

CTAATCTTCAACTCCTACATACTTCC

A

87

R23

ATCTGTTTTTAAGCCTAATGTGG

A

88

F65

AAGATTAAGAGAACCAACACCTCT

A

89

F66

AACAACCGACTAATCACCACCCAACAATG

A

90

F67

TCATCTTCACAATTCTAATTCTACTG

A

91

F68

TCGAGTCTCCCTTCACCATT

A

92

F69

CGGCTTCGACCCTATATCC

A

93

R24

GGTAAAAGGAGGGCAATTTCT

A

94

F70

CTACTCTCATAACCCTCAACACC

A

95

F71

ATTAAACCAGACCCAGCTACG

A

96

F72

AGCATATTTCACCTCCGCTAC

A