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Figure 4 | BMC Genomics

Figure 4

From: Two distinct modes of nucleosome modulation associated with different degrees of dependence of nucleosome positioning on the underlying DNA sequence

Figure 4

Comparison of the intrinsic DNA sequence preferences for nucleosomes between both promoter classes. The sequence preferences for nucleosomes were taken from Segal et al. [15]. These values were normalized, such that their values are between 0 and 1. Each sub-sequence with the length of the nucleosome was assigned a sequence preferences value for nucleosomes. For each promoter, we used the top ten maximal preferences values (A) or the mean preferences value (B) to represent its intrinsic DNA sequence preferences for nucleosomes. Distributions of preferences values are shown for SDN-enriched promoters (green), SDN-less promoters (red) and all promoters (blue).

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