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Table 1 List of honey bee and mouse HVS genes

From: Expression profiles of urbilaterian genes uniquely shared between honey bee and vertebrates

Apis

GLEAN model

Mouse Accession Number

E-value

Name/Comments

Tissues highly expressed

Proteins with known domains

Honey bee

Mouse

GB13403

NP_084053.2

2.00E-34

Rhbdd1

rhomboid domain containing 1

Ubiquitous

Ubiquitous

GB15999

NP_001001184.1

2.00E-60

Ccdc111

coiled-coil domain containing 111

Brain

Selective

GB16203

NP_083670.1

2.00E-12

Snx24

sorting nexing 24

Brain/Abdomen

Spleen

 

NP_001020783.1

6.00E-12

Snx22

sorting nexing 22

 

Selective

GB17738

NP_598396.1

2.00E-53

Rtkn

rhotekin

Brain/Thorax

Selective

 

XP_925652.1

3.00E-50

LOC631847

similar to pleckstrin homology domain containing, family K member 1

 

Lung

GB13871

NP_082305.1

8.00E-53

Tuba

dynamin binding protein

Brain

Selective

 

NP_808496.1

6.00E-47

4933429F08Rik

hypothetical protein LOC328967

 

Brain/Testis

GB14232

NP_001003963.1

4.00E-82

Dnmt3b

DNA methyltransferase 3B

Brain/Abdomen

Brain/Testis

 

NP_031898.1

8.00E-74

Dnmt3a

DNA methyltransferase 3A

 

Ubiquitous

GB15274

NP_033873.3

1.00E-09

Bcl2l1

Bcl2-like 1

Brain/Abdomen

Selective

 

NP_803129

1.00E-07

Bcl2

B-cell leukemia/lymphoma 2

 

Selective

GB15533

NP_080099.1

3.00E-16

Pcyox1

prenylcysteine oxidase 1

Brain

Brain

 

NP_766420.1

6.00E-16

Pcyox1l

prenylcysteine oxidase 1 like

 

Selective

GB16549

NP_783199.1

9.00E-08

Hop

homeodomain only protein

Ubiquitous

Selective

GB16908

NP_067303.1

4.00E-20

Bin3

bridging integrator 3

Brain

Selective

GB17445

NP_035789.1

5.00E-07

Tnfrsf4

tumor necrosis factor receptor superfamily, member 4

Brain/Abdomen

Selective

 

NP_849262.1

1.00E-06

Tnfrsf14

tumor necrosis factor receptor superfamily member 14

 

Selective

GB14717

NP_001028486.1

1.00E-37

C530028I08Rik

hypothetical protein LOC232933

Brain

Testis

GB15370

NP_080142.1

4.00E-41

Cdca7

cell division cycle associated 7

Brain/Thorax

Brain/Testis

 

NP_666152.1

2,00E-40

Cdca7l

cell division cycle associated 7 like

 

Selective

GB14468

NP_067360.1

3.00E-50

Rad18

RAD18 homolog

Brain

Testis

GB10755

NP_659185.1

4.00E-10

Tmem45b

transmembrane protein 45b

Brain

Selective

 

NP_062605.2

6.00E-03

Tmem45a

transmembrane protein 45a

 

Selective

GB18761

NP_038957.1

2.00E-13

Siva1

Cd27 binding protein (Hindu God of destruction)

Brain

Ubiquitous

 

XP_486223

6.00E-07

LOC434405

similar to Apoptosis regulatory protein Siva

 

Ubiquitous

GB10273

NP_082325.1

1.00E-11

Fbxo22

F-box protein 22

Brain

Ubiquitous

GB18346

XP_138107

9.00E-47

LOC217738

similar to thrombospondin, type I domain containing 3

Brain

Brain/Testis

 

XP_996152

1.00E-45

5430433G21Rik

similar to isthmin 1

 

Lung

GB18120

NP_084460.1

5.00E-23

Armc9

armadillo repeat containing 9

Brain

Brain/Testis

GB18050

NP_083116.1

4.00E-09

Armc1

armadillo repeat-containing protein

Brain

Ubiquitous

GB19733

NP_056637.1

1.00E-50

Fbxl3

F-box and leucine-rich repeat protein 3

Brain

Ubiquitous

 

NP_848789.2

1.00E-46

Fbxl21

F-box and leucine-rich repeat protein 21

 

Selective

Proteins without known domains

GB18937

NP_080777.1

3.00E-06

1300010M03Rik

hypothetical protein LOC67998

Ubiquitous

Ubiquitous

 

NP_001030023.1

8.00E-04

1810015C04Rik

hypothetical protein LOC66270

 

Selective

GB19146

NP_950182.1

2.00E-15

9230110C19Rik

hypothetical protein LOC234912

Brain

Selective

GB11010

NP_780695.1

1.00E-08

6430571L13Rik

hypothetical protein LOC235599

Brain

Selective

GB17260

XP_989436.1

1.00E-04

1700012P22Rik

hypothetical protein LOC69364

Brain

Brain/Testis

GB16350

NP_081465.1

2.00E-11

Gemin7

gem (nuclear organelle) associated protein 7

Ubiquitous

Ubiquitous

GB14271

NP_081498.1

1.00E-07

2010001M09Rik

hypothetical protein LOC69816

Brain

Selective

GB17835

NP_082206.1

1.00E-13

2610016C23Rik

DUF729 domain containing 1

Brain

Brain/Testis

 

NP_080458.1

3.00E-09

Mtfr1

chondrocyte protein with a poly-proline region

 

Ubiquitous

GB18344

NP_001028397.2

2.00E-08

Pnrc1

proline-rich nuclear receptor coactivator 1

Ubiquitous

Brain

 

NP_080659.1

4.00E-07

Pnrc2

proline-rich nuclear receptor coactivator 2

 

Ubiquitous

GB15864

NP_899139.2

2.00E-05

Snapc5

small nuclear RNA activating complex, polypeptide 5

Brain/Thorax

Selective

  1. The genes categorized as transcription and modification of DNA as well as RNA processing by GO system are indicated with bold letters. The expression domains of honey bee and mouse HVS genes are listed in the right column. The genes ubiquitously and selectively expressed in the tissues are indicated as Ubiquitous and Selective, respectively. The genes highly expressed in the brains of both honey bee and mouse are shown with bold letters. The sequences of honey bee GLEAN models are available in BCM database http://www.hgsc.bcm.tmc.edu/projects/honeybee/ and BeeBase http://www.beebase.org/.