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Table 4 Overall SNP call percentages and statistics obtained in Phase II study.

From: Two-stage genome-wide association study identifies integrin beta 5 as having potential role in bull fertility

Allelic variation

SNP markers

 

rs29016875

rs29015574

rs29024867

rs41257187

C/C

85 (42%)

128 (64%)

0 (0%)

108 (54%)

T/T

25 (12%)

6 (3%)

 

18 (9%)

C/T

91 (45%)

66 (33%)

 

74 (37%)

G/G

  

156 (78%)

 

G/C

  

44 (22%)

 

Total of bulls

201

200

200

200

Test for HWE

0.7566

0.6511

0.3197

0.3730

P values

0.0907

0.1853

0.0313*

0.0483*

  1. Asterix (*) indicates significant association.
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BMC Genomics

ISSN: 1471-2164

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