aFunctional group | bNo. of genes | cUpstream regions < 2000 nt | dAverage Pearson value | eStrong motif groups |
---|---|---|---|---|
Ring/early trophozoite | ||||
Transcription machinery | 22 | 15 | 0.76 | G-rich |
Cytoplasmic Translation Machinery | 132 | 60 | 0.83 | G-rich, C-rich, TGTG |
Glycolytic pathway | 11 | 2 | 0.70 | G-rich |
Ribonucleotide synthesis | 16 | 11 | 0.66 | G-rich |
Trophozoite/early schizont | ||||
Deoxynucleotide synthesis | 6 | 1 | 0.88 | no strong motif group identified |
DNA replication machinery | 32 | 15 | 0.81 | TGTG, G-rich, CACA, C-rich |
TCA cycle | 8 | 3 | 0.67 | G-rich |
Proteasome | 28 | 17 | 0.70 | G-rich, CACA, TGTATG |
Mitochondrial genes | 15 | 12 | 0.72 | C-rich, TGTG, G-rich |
Organellar Translation machinery | 33 | 27 | 0.74 | C-rich, G-rich, TGTG |
Schizont | ||||
Merozoite invasion | 55 | 22 | 0.75 | TGCACA, TGTATG, C-rich, G-rich |
Actin myosin motility | 10 | 5 | 0.83 | TGCACA, TGTG, G-rich |
Early ring | ||||
Early ring transcripts | 24 | 2 | 0.71 | no strong motif group identified |