Table 7 Genes with putative cummulative upegulation in blastocysts obtained after serial rounds of chromatin tranfer
From: Transcriptional reprogramming of gene expression in bovine somatic cell chromatin transfer embryos
Probe Set ID | Gene Title | Gene Symbol | IVF | CT1 | CT4 | Fold change IVF/CT1 | Fold change IVF/CT4 |
|---|---|---|---|---|---|---|---|
Bt.4475.1.S1_at | NADH dehydrogenase (ubiquinone) Fe-S protein 2, 49 kDa (NADH-coenzyme Q reductase) | NDUFS2 | 6724.02 | 13373.15 | 14960.42 | 1.99 | 2.22 |
Bt.3583.1.S1_at | villin 2 | VIL2 | 6698.24 | 13698.40 | 17209.52 | 2.05 | 2.57 |
Bt.663.1.S1_at | palladin, cytoskeletal associated protein | PALLD | 5038.25 | 14502.45 | 19368.34 | 2.88 | 3.84 |
Bt.9068.1.S1_at | non-muscle myosin heavy chain | LOC404108 | 3,972.71 | 6,504.05 | 8,152.57 | 1.64 | 2.05 |
Bt.2841.1.S1_at | tryptophanyl-tRNA synthetase | WARS | 2,665.06 | 4,276.85 | 5,569.16 | 1.60 | 2.09 |
Bt.4311.1.S1_at | guanidine nucleotide binding protein, (G protein), alpha inhibiting activity polypeptide 2 | GNAI2 | 2,389.08 | 3,859.15 | 7,740.86 | 1.62 | 3.24 |
Bt.962.1.S1_at | golgi autoantigen, golgin subfamily a, 7 | GOLGA7 | 1,689.70 | 2,728.90 | 4,288.07 | 1.62 | 2.54 |
Bt.760.1.S1_at | zinc finger protein 313 | Znf313 | 1,523.55 | 2,140.45 | 3,126.63 | 1.40 | 2.05 |
Bt.803.1.A1_at | chromatin modifying protein 1B | CHMP1B | 1,315.99 | 2,093.75 | 3,934.13 | 1.59 | 2.99 |
Bt.4503.1.S1_at | mitochondrial carrier homolog 2 | Mtch2 | 1,279.84 | 3,359.75 | 4,555.63 | 2.63 | 3.56 |
Bt.23603.3.S1_at | F-box protein 9 | FBXO9 | 1,058.76 | 1,948.25 | 2,813.78 | 1.84 | 2.66 |
Bt.7169.1.S1_at | methylmalonyl Coenzyme A mutase | MUT | 898.23 | 1,622.10 | 1,943.02 | 1.81 | 2.16 |
Bt.14010.1.S1_at | leukotriene B4 12-hydroxydehydrogenase | LTB4DH | 841.63 | 5688.55 | 11345.50 | 6.76 | 13.48 |
Bt.8933.1.S1_at | adaptor-related protein complex 3, sigma 2 subunit | AP3S2 | 667.54 | 1,071.50 | 1,425.67 | 1.61 | 2.14 |
Bt.12261.1.A1_at | taspase 1 | C20orf13 | 435.56 | 1,113.20 | 1,293.73 | 2.56 | 2.97 |
Bt.4738.1.S1_at | calpastatin | CAST | 329.41 | 504.45 | 890.74 | 1.53 | 2.70 |
Bt.26764.1.A1_at | Lectomedin 2 | LEC2 | 307.46 | 1,085.70 | 1,567.79 | 3.53 | 5.10 |
Bt.1388.1.S1_at | Abl-philin 2 isoform 2 | ZDHHC16 | 286.19 | 630.40 | 948.26 | 2.20 | 3.31 |
Bt.20236.1.S1_at | thrombospondin repeat containing 1 | ADAMTSL4 | 211.65 | 322.35 | 522.48 | 1.52 | 2.47 |
Bt.5330.1.S1_at | lysosomal-associated membrane protein 1 | LAMP1 | 194.91 | 174.90 | 1,195.48 | 0.90 | 6.13 |
Bt.8870.3.S1_at | CGI-119 protein | CGI-119 | 128.16 | 218.35 | 403.76 | 1.70 | 3.15 |
Bt.23209.1.S1_a_at | lectomedin 2 | LEC2 | 83.06 | 279.90 | 418.46 | 3.37 | 5.04 |
Bt.318.1.S1_at | adrenergic, beta 3, receptor | ADRB3 | 26.17 | 52.65 | 89.07 | 2.01 | 3.40 |
Bt.4057.1.S1_at | myosin, heavy polypeptide 10, non-muscle | MYH10 | 21.07 | 38.95 | 83.71 | 1.85 | 3.97 |
Bt.4560.1.S1_s_at | trophoblast Kunitz domain protein 1 | TKDP1 | 21.03 | 43.25 | 88.08 | 2.06 | 4.19 |
Bt.22858.1.S1_at | uroplakin IIIB | UPK3B | 16.02 | 16.70 | 100.71 | 1.04 | 6.29 |
Bt.12304.1.S1_at | interferon-stimulated protein, 15 kDa | ISG15 | 15.51 | 67.95 | 66.46 | 4.38 | 4.29 |
Bt.26830.2.S1_a_at | 5,10-methylenetetrahydrofolate reductase (NADPH) | MTHFR | 12.02 | 57.85 | 79.11 | 4.81 | 6.58 |
Bt.5101.1.S1_at | prion protein interacting protein | PRNPIP | 8.97 | 32.00 | 74.73 | 3.57 | 8.33 |
Bt.17862.1.A1_at | Guanine nucleotide binding protein (G protein), alpha stimulating activity polypeptide 1 | GNAS1 | 8.03 | 42.00 | 44.87 | 5.23 | 5.59 |
Bt.2301.1.S1_at | Zinc finger protein 325 (gonadotropin inducible transcription repressor-3) | ZNF325 | 3.81 | 22.10 | 121.65 | 5.80 | 31.93 |
Bt.17862.1.A1_at | Guanine nucleotide binding protein (G protein), alpha stimulating activity polypeptide 1 | GNAS1 | 8.03 | 42.00 | 44.87 | 5.23 | 5.59 |
Bt.12304.1.S1_at | interferon-stimulated protein, 15 kDa | ISG15 | 15.51 | 67.95 | 66.46 | 4.38 | 4.29 |
Bt.12261.1.A1_at | taspase 1 | C20orf13 | 435.56 | 1113.20 | 1293.73 | 2.56 | 2.97 |
Bt.3583.1.S1_at | villin 2 | VIL2 | 6698.24 | 13698.40 | 17209.52 | 2.05 | 2.57 |